BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0040.1
(147 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G16970.1 | Plant self-incompatibility protein S1 family | Chr... 67 1e-14
AT1G04645.1 | Plant self-incompatibility protein S1 family | Chr... 65 3e-14
AT4G16195.1 | Plant self-incompatibility protein S1 family | Chr... 59 3e-11
AT4G16295.1 | S-protein homologue 1 | Chr4:9215680-9216135 REVER... 58 5e-11
AT4G29035.1 | Plant self-incompatibility protein S1 family | Chr... 54 7e-10
>AT3G16970.1 | Plant self-incompatibility protein S1 family |
Chr3:5793668-5794090 REVERSE LENGTH=140 | 201606
Length = 140
Score = 67.0 bits (162), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Query: 40 VSILNEIR-YAELIIHCKSKDDDFGEKRLAYNVYSEWKFRTSFFGGTLYWCSMNWYNIKT 98
V I N++ + L HCKSK+DD G++ +A N ++FR S FGGTL++C W K
Sbjct: 30 VVIYNDLGGHLPLRYHCKSKNDDLGDRNMAVNGTWSFEFRPSVFGGTLFFCGFIW--DKE 87
Query: 99 NTWVTASHEVFNQNTYSNICDDCQWYVREDGIYRLNSNNNVTEFIYNWD 147
W + ++ C C+W +R+DG +LN N+N+ + W+
Sbjct: 88 LHWFDIYKQSRDREFAEFGCRRCEWKIRKDGPCKLNKNSNMFDVCLPWN 136
>AT1G04645.1 | Plant self-incompatibility protein S1 family |
Chr1:1293853-1294239 REVERSE LENGTH=128 | 201606
Length = 128
Score = 65.5 bits (158), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 6/102 (5%)
Query: 35 WVPARVSILNEIRYAELIIHCKSKDDDFGEKRLAYNVYSEWKFRTSFFGGTLYWCSMNWY 94
W V++ N I L IHCKSK DD G + + +KF+ + + TL++CS W
Sbjct: 26 WRATVVTMTNLIGGPPLTIHCKSKQDDLGIHVVPFKQEYHFKFQPNLWKSTLFFCSFQWD 85
Query: 95 NIKTNTWVTASHEVFNQNTYSNICDDCQWYVREDGIYRLNSN 136
+ S ++++ ICDDCQW ++ DG RL
Sbjct: 86 S------QFKSFDIYDAQRDQGICDDCQWEIKPDGPCRLGKK 121
>AT4G16195.1 | Plant self-incompatibility protein S1 family |
Chr4:9173165-9173650 REVERSE LENGTH=161 | 201606
Length = 161
Score = 58.5 bits (140), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 20/152 (13%)
Query: 12 FGLIIAYLMAFAILAKECSTQNIWVPARVSILNEI-----RYAE----------LIIHCK 56
L I + L++ +I VP S N + R E L+ HCK
Sbjct: 8 LSLFILIIFITTKLSQADHKNDIPVPNDPSSTNSVFPTSKRTVEINNDLGNQLTLLYHCK 67
Query: 57 SKDDDFGEKRLAYNVYSEWKFRTSFFGGTLYWCSMNWYNIKTNTWVTASHEVFNQNTYSN 116
SKDDD G + L + F FFG TLY+CS +W N + + H + N
Sbjct: 68 SKDDDLGNRTLQPGESWSFSFGRQFFGRTLYFCSFSWPNESHSFDIYKDHR---DSGGDN 124
Query: 117 IC--DDCQWYVREDGIYRLNSNNNVTEFIYNW 146
C D C W +R +G R N + Y W
Sbjct: 125 KCESDRCVWKIRRNGPCRFNDETKQFDLCYPW 156
>AT4G16295.1 | S-protein homologue 1 | Chr4:9215680-9216135 REVERSE
LENGTH=151 | 201606
Length = 151
Score = 57.8 bits (138), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 12 FGLIIAYLMAFA----ILAKECSTQNIWVPA----RVSILNEIRYAE-LIIHCKSKDDDF 62
F L I + +A +L +T++I VP +V+++N + E L IHCKSK+DD
Sbjct: 7 FLLAICFSLALTCQDHVLVGGTTTRDIIVPKISEWQVTVVNGLTTGETLFIHCKSKEDDL 66
Query: 63 GEKRLAYNVYSEWKFRTSFFGGTLYWCSMNWYNIKTNTWVTASHEV-FNQNTYSNICDDC 121
GE L + W F + T +WC MN N N V + F++ + N C
Sbjct: 67 GEINLKFRNRFSWNFGENMLHSTFFWCYMNKDNGHMNVNVFWDDVILFHRCGWKN----C 122
Query: 122 QWYVREDGIYRLNS 135
W + DG+Y NS
Sbjct: 123 IWTAKTDGLYLWNS 136
>AT4G29035.1 | Plant self-incompatibility protein S1 family |
Chr4:14310315-14310770 FORWARD LENGTH=151 | 201606
Length = 151
Score = 54.3 bits (129), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 24 ILAKECSTQNIWVPA----RVSILNEIRYAE-LIIHCKSKDDDFGEKRLAYNVYSEWKFR 78
+LA++ +T++I VP +V++ N + E L IHCKSK++D G+ L + W F
Sbjct: 23 VLARDTTTRDIVVPKISEWQVTVANGLTTGETLFIHCKSKENDLGDINLKFLDRFSWNFG 82
Query: 79 TSFFGGTLYWCSMNWYNIKTNTWVTASHEV-FNQNTYSNICDDCQWYVREDGIYRLNS 135
+ TL+WC M+ + N V + F++ + N C W + DG+Y NS
Sbjct: 83 ENMLHSTLFWCYMSKDDGHMNVKVFWDDVILFHRCDWKN----CVWTAKNDGLYLWNS 136