BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0100.1
(91 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17300.3 | COMPLEX 1 LYR-like protein | Chr3:5907616-5908695 ... 145 4e-47
AT3G17300.1 | COMPLEX 1 LYR-like protein | Chr3:5907616-5908695 ... 145 4e-47
AT3G17300.2 | COMPLEX 1 LYR-like protein | Chr3:5907659-5908695 ... 87 5e-24
>AT3G17300.3 | COMPLEX 1 LYR-like protein | Chr3:5907616-5908695
FORWARD LENGTH=91 | 201606
Length = 91
Score = 145 bits (367), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 79/88 (89%)
Query: 1 MPALQTALPPELANNALRLYRECLRRARFIGHRQNNTELVVDMVRQQFKKNMHEKDPEKI 60
MP+LQT+LPPELANN +RLYRECLRRA+FIG +Q+NTELVV MVRQQFKK+M+E DPEKI
Sbjct: 1 MPSLQTSLPPELANNVVRLYRECLRRAKFIGKQQHNTELVVGMVRQQFKKHMNETDPEKI 60
Query: 61 HKMKEDAARGLINHMLLESEKMSGRKFS 88
K+K+DAARGLINHML ES K++G K S
Sbjct: 61 QKLKDDAARGLINHMLFESAKLTGGKVS 88
>AT3G17300.1 | COMPLEX 1 LYR-like protein | Chr3:5907616-5908695
FORWARD LENGTH=91 | 201606
Length = 91
Score = 145 bits (367), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 67/88 (76%), Positives = 79/88 (89%)
Query: 1 MPALQTALPPELANNALRLYRECLRRARFIGHRQNNTELVVDMVRQQFKKNMHEKDPEKI 60
MP+LQT+LPPELANN +RLYRECLRRA+FIG +Q+NTELVV MVRQQFKK+M+E DPEKI
Sbjct: 1 MPSLQTSLPPELANNVVRLYRECLRRAKFIGKQQHNTELVVGMVRQQFKKHMNETDPEKI 60
Query: 61 HKMKEDAARGLINHMLLESEKMSGRKFS 88
K+K+DAARGLINHML ES K++G K S
Sbjct: 61 QKLKDDAARGLINHMLFESAKLTGGKVS 88
>AT3G17300.2 | COMPLEX 1 LYR-like protein | Chr3:5907659-5908695
FORWARD LENGTH=74 | 201606
Length = 74
Score = 87.0 bits (214), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 41/55 (74%), Positives = 48/55 (87%)
Query: 34 QNNTELVVDMVRQQFKKNMHEKDPEKIHKMKEDAARGLINHMLLESEKMSGRKFS 88
Q+NTELVV MVRQQFKK+M+E DPEKI K+K+DAARGLINHML ES K++G K S
Sbjct: 17 QHNTELVVGMVRQQFKKHMNETDPEKIQKLKDDAARGLINHMLFESAKLTGGKVS 71