BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0150.1
(513 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-44
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 167 3e-44
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 52 4e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 118/171 (69%), Gaps = 8/171 (4%)
Query: 351 QVEGVDYHDTFAPVAKLVTIR---ALFSVVVWPLHQLDVNNAFLQGDLDEEVYMTSPPGF 407
Q EG+D+ +TF+PV KL +++ A+ ++ + LHQLD++NAFL GDLDEE+YM PPG+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 408 S-RTGD----HKVCHLHKSLYELKQASQQWFTKFSTGLQAEGFKQSSFDHSLFCFFDDPT 462
+ R GD + VC+L KS+Y LKQAS+QWF KFS L GF QS DH+ F
Sbjct: 217 AARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATL 276
Query: 463 AIYVLVYVDDIIITGNNASEISSLQLRLEKRFSLKNLGRLQYFLGIEVSRS 513
+ VLVYVDDIII NN + + L+ +L+ F L++LG L+YFLG+E++RS
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 167 bits (424), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 118/171 (69%), Gaps = 8/171 (4%)
Query: 351 QVEGVDYHDTFAPVAKLVTIR---ALFSVVVWPLHQLDVNNAFLQGDLDEEVYMTSPPGF 407
Q EG+D+ +TF+PV KL +++ A+ ++ + LHQLD++NAFL GDLDEE+YM PPG+
Sbjct: 157 QQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGY 216
Query: 408 S-RTGD----HKVCHLHKSLYELKQASQQWFTKFSTGLQAEGFKQSSFDHSLFCFFDDPT 462
+ R GD + VC+L KS+Y LKQAS+QWF KFS L GF QS DH+ F
Sbjct: 217 AARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATL 276
Query: 463 AIYVLVYVDDIIITGNNASEISSLQLRLEKRFSLKNLGRLQYFLGIEVSRS 513
+ VLVYVDDIII NN + + L+ +L+ F L++LG L+YFLG+E++RS
Sbjct: 277 FLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARS 327
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 37/47 (78%)
Query: 464 IYVLVYVDDIIITGNNASEISSLQLRLEKRFSLKNLGRLQYFLGIEV 510
+Y+L+YVDDI++TG++ + ++ L +L FS+K+LG + YFLGI++
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI 47