BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0220.1
(269 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 64 6e-12
AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 57 8e-10
AT2G33160.1 | glycoside hydrolase family 28 protein / polygalact... 56 1e-08
AT1G04625.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 54 2e-08
AT1G47497.2 | Polynucleotidyl transferase%2C ribonuclease H-like... 51 7e-08
>AT1G27870.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:9706657-9707298 REVERSE
LENGTH=213 | 201606
Length = 213
Score = 63.9 bits (154), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 111 GEARINVDGSFKNGD--GASAVVIRSYNNTFM-AAETEFYNAGNAIETEAKSVLMGLKLA 167
G + N DGSF NGD + V+R N +++ A + NA+E+E +++++ ++
Sbjct: 58 GWIKCNFDGSFVNGDVKSKAGWVVRDSNGSYLLAGQAIGRKVDNALESEIQALIISMQHC 117
Query: 168 KKLSHKRVVIEGDSSTIIQVCQTKNDNAPCQVRNVIMDIHNEAQRFEKVEFYHISRELNE 227
+KRV EGD+ + + V N I DIH ++FE + F I R N
Sbjct: 118 WSHGYKRVCFEGDNKMLFDL--INGSKVYFGVHNWIRDIHWWLRKFESIHFNWIRRHHNT 175
Query: 228 IADTLAKETL 237
AD LAK L
Sbjct: 176 PADILAKAPL 185
>AT2G46460.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr2:19071537-19072019 FORWARD
LENGTH=160 | 201606
Length = 160
Score = 57.0 bits (136), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 68/129 (52%), Gaps = 4/129 (3%)
Query: 111 GEARINVDGSF-KNGDGASAVVIRSYNNTFMAAETEFYN-AGNAIETEAKSVLMGLKLAK 168
G + N DGS+ + + +IR + F++A N NA+E+E +++L+ ++
Sbjct: 9 GWKKCNYDGSYNREMPSKAGWIIRDESGQFVSAGQATGNHTSNALESEFQALLITMQSCW 68
Query: 169 KLSHKRVVIEGDSSTIIQVCQTKNDNAPCQVRNVIMDIHNEAQRFEKVEFYHISRELNEI 228
H+++ EGD+ ++++ + + + N I D+ QRF++ F I+R+ N+
Sbjct: 69 SHGHRKIWFEGDNREVMEILNRRK--SRFDIFNWIRDVQAWKQRFQECRFTWINRKQNKP 126
Query: 229 ADTLAKETL 237
AD LAK L
Sbjct: 127 ADILAKSHL 135
>AT2G33160.1 | glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein |
Chr2:14053404-14056246 FORWARD LENGTH=664 | 201606
Length = 664
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 111 GEARINVDGSFKNGD--GASAVVIRSYNNTFMAAETEFYNA-GNAIETEAKSVLMGLKLA 167
G + NVDGSF NG+ G ++R +N + A N NA+E E +++LM ++
Sbjct: 509 GWVKCNVDGSFINGNIPGKGGWIVRDHNGRYEFAGQAIGNCIDNALECEFQALLMAMQHC 568
Query: 168 KKLSHKRVVIEGDSSTIIQVCQTKNDNAPCQVRNVIMDIHNEAQRFEKVEFYHISRELNE 227
++R+ EGD+ + + + N I DI A +FE+ +F +R+ N+
Sbjct: 569 WSKGYRRICFEGDNKEMFDLINGLKMHF--GAFNWIRDILWWASKFEQTQFQWTNRQNNK 626
Query: 228 IADTLAKETL 237
AD LA+ L
Sbjct: 627 PADILARTPL 636
>AT1G04625.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:1287831-1289820 REVERSE
LENGTH=257 | 201606
Length = 257
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 106 VTLMVGEARINVDGSF-KNGDGASAVVIRSYNNTFMAAETEFYN-AGNAIETEAKSVLMG 163
T +G + N DG++ N + ++R TF+ A + N +E+E ++++M
Sbjct: 83 TTPPIGWTKCNYDGTYHSNAPSKAGWLLRDDRGTFLGAAHAIGSITTNPMESELQALVMA 142
Query: 164 LKLAKKLSHKRVVIEGDSSTIIQVCQTKNDNAPCQVRNVIMDIHNEAQRFEKVEFYHISR 223
++ ++++ EGD+ + ++ ++ N V N I DI +FE+ +F R
Sbjct: 143 MQHCWSRGYRKIYFEGDNKEVSEIVNGRSSNFA--VFNWIRDISAWRSKFEECKFTWTRR 200
Query: 224 ELNEIADTLAKETLTL 239
N AD LAK+ L L
Sbjct: 201 FSNMAADALAKQQLPL 216
>AT1G47497.2 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | Chr1:17431038-17431454 REVERSE
LENGTH=138 | 201606
Length = 138
Score = 50.8 bits (120), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Query: 131 VIRSYNNTFMAAETEFYN-AGNAIETEAKSVLMGLKLAKKLSHKRVVIEGDSSTIIQVCQ 189
VIR + F+ A N NA+E+E +++L+ ++ H+++ EGD+ ++++
Sbjct: 8 VIRDESGQFVGAGQATGNHTSNALESEFQALLIAMQSCWSHGHRKIWFEGDNREVMEILN 67
Query: 190 TKNDNAPCQVRNVIMDIHNEAQRFEKVEFYHISRELNEIADTLAKETL 237
+ + N I D+ QRF++ F I+R+ N+ AD LAK L
Sbjct: 68 RRK--SRFDTFNWIRDVQAWKQRFQECRFTWINRKQNKPADILAKSHL 113