BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0240.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G64250.2 | Aldolase-type TIM barrel family protein | Chr5:256... 107 8e-29
AT5G64250.1 | Aldolase-type TIM barrel family protein | Chr5:256... 70 3e-15
>AT5G64250.2 | Aldolase-type TIM barrel family protein |
Chr5:25697623-25698945 REVERSE LENGTH=333 | 201606
Length = 333
Score = 107 bits (266), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 56/113 (49%), Positives = 76/113 (67%), Gaps = 8/113 (7%)
Query: 5 GILGFDNGIILAPMGADVSGPELVAAVANAG--------VQNGYEMMVKAIKDTRKLTNK 56
GILGF+ GI+ AP+G D+SGPELVAAVANAG + + + I+ T+ LT K
Sbjct: 3 GILGFEYGIVQAPLGPDISGPELVAAVANAGGIGLLRCPDWECPDYLRELIRKTKTLTEK 62
Query: 57 PFGAGVLLKFNEVQTIKAIYDEKLACMEVYWGDFPKEMVDEAHKHGVKIIHQL 109
PFG GV+L F IK I +EK+A +++YWGD +E+VD+AH GVK+I Q+
Sbjct: 63 PFGIGVVLAFPHDLNIKTILEEKVAVLQLYWGDCSQELVDDAHFAGVKVIPQV 115
>AT5G64250.1 | Aldolase-type TIM barrel family protein |
Chr5:25697623-25698752 REVERSE LENGTH=293 | 201606
Length = 293
Score = 70.5 bits (171), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 37 QNGYEMMVKAIKDTRKLTNKPFGAGVLLKFNEVQTIKAIYDEKLACMEVYWGDFPKEMVD 96
Q + + + I+ T+ LT KPFG GV+L F IK I +EK+A +++YWGD +E+VD
Sbjct: 3 QECPDYLRELIRKTKTLTEKPFGIGVVLAFPHDLNIKTILEEKVAVLQLYWGDCSQELVD 62
Query: 97 EAHKHGVKIIHQL 109
+AH GVK+I Q+
Sbjct: 63 DAHFAGVKVIPQV 75