BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0260.1
(255 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 58 2e-09
AT1G40390.1 | DNAse I-like superfamily protein | Chr1:15432576-1... 55 1e-08
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 49 ELMDMGFKRNPFTWSNRQSGDKLIQERLDRALSNHPWLQRYRSC-GINHLDSVGSDHLPI 107
+L+D+ + +TWSN Q + +I+ +LDRA++N W + S + L V SDH P
Sbjct: 260 DLVDIPSRGVHYTWSNHQDDNPIIR-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPC 317
Query: 108 LLSMQENKDTKAKPFKFARTWMSHPDCHEFIAEKWASTRQNYTNDNIQTNLKRLSIHLTN 167
++ ++ K F++ +HP + W + +++ L HL
Sbjct: 318 IIILENLPKRSKKCFRYFSFLSTHPTFLVSLTVAWEE------QIPVGSHMFSLGEHLKA 371
Query: 168 -------WNKKVFGNIDNNITQTIKALQNCKNK--EEESRLISKLEELYEFQ-------- 210
N++ FGNI + + + +L++ +++ S + ++E + +
Sbjct: 372 AKKCCKLLNRQGFGNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARKKWNFFAAAL 431
Query: 211 ESLWKEKSRNNFINLGDKNTKYFHSQAIQRGRNNKI 246
ES +++KSR ++ GD NT++FH + N I
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLI 467
>AT1G40390.1 | DNAse I-like superfamily protein |
Chr1:15432576-15434674 REVERSE LENGTH=426 | 201606
Length = 426
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 4/141 (2%)
Query: 5 NPGPDTPWVVIGDLNIILDPQEKRGGTNSTNSL--TPKITSIINELELMDMGFKRNPFTW 62
+P ++PW+V+GD N I E S SL + + + + +L+D+ + +TW
Sbjct: 115 SPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSDLVDLPCRGVLYTW 174
Query: 63 SNRQSGDKLIQERLDRALSNHPWLQRYRSCGINHLDSVGSDHLPILLSMQENKD-TKAKP 121
SN Q D I +LDRA+ N WL + + SDH ++ + + +K K
Sbjct: 175 SNHQQ-DNPILRKLDRAIVNGCWLATFPTASAIFDPPSDSDHAACMVILNNSPPLSKKKS 233
Query: 122 FKFARTWMSHPDCHEFIAEKW 142
FK+ +HPD I W
Sbjct: 234 FKYFSFLSTHPDFISSILAAW 254