BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0270.1
(178 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 68 1e-13
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 68 1e-13
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 47 2e-06
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.2 bits (165), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 46/196 (23%)
Query: 5 QCTRSDIAYAVSKLSRYTSNP-------------------------------------DA 27
Q TR DI++AV+KLS+++ P DA
Sbjct: 389 QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 28 NWISSGDAKKSTTDWIFTFGGGATSWGSKKQTCVTYSTTESEFIALAATGKEVEWLRDLL 87
++ S D ++ST + G SW SKKQ V+ S+ E+E+ AL+ E+ WL
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 88 --IEIPFTKKPILPVSIFCDSQTTLPRAYSGVYSRKSRHI-SLQHEYVKQLIQDGMISIT 144
+++P +K P +FCD+ + A + V+ +++HI S H ++ + +S +
Sbjct: 509 RELQLPLSK----PTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYS 564
Query: 145 FVRSNQNLADPFTKHL 160
F ++ D FT++L
Sbjct: 565 FQAYDEQ--DGFTEYL 578
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 68.2 bits (165), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 89/196 (45%), Gaps = 46/196 (23%)
Query: 5 QCTRSDIAYAVSKLSRYTSNP-------------------------------------DA 27
Q TR DI++AV+KLS+++ P DA
Sbjct: 389 QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
Query: 28 NWISSGDAKKSTTDWIFTFGGGATSWGSKKQTCVTYSTTESEFIALAATGKEVEWLRDLL 87
++ S D ++ST + G SW SKKQ V+ S+ E+E+ AL+ E+ WL
Sbjct: 449 SFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFF 508
Query: 88 --IEIPFTKKPILPVSIFCDSQTTLPRAYSGVYSRKSRHI-SLQHEYVKQLIQDGMISIT 144
+++P +K P +FCD+ + A + V+ +++HI S H ++ + +S +
Sbjct: 509 RELQLPLSK----PTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYS 564
Query: 145 FVRSNQNLADPFTKHL 160
F ++ D FT++L
Sbjct: 565 FQAYDEQ--DGFTEYL 578
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 26 DANWISSGDAKKSTTDWIFTFGGGATSWGSKKQTCVTYSTTESEFIALAATGKEVEW 82
D++W ++STT + G SW +K+Q V+ S+TE+E+ ALA T E+ W
Sbjct: 169 DSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225