BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0480.1
(364 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18380.2 | F-box family protein | Chr4:10157957-10159099 FORW... 336 e-113
AT4G18380.1 | F-box family protein | Chr4:10157957-10159099 FORW... 336 e-113
AT5G46170.1 | F-box family protein | Chr5:18715638-18716825 REVE... 324 e-109
AT1G30200.2 | F-box family protein | Chr1:10625147-10626286 FORW... 320 e-107
AT1G30200.1 | F-box family protein | Chr1:10625147-10626286 FORW... 320 e-107
>AT4G18380.2 | F-box family protein | Chr4:10157957-10159099 FORWARD
LENGTH=380 | 201606
Length = 380
Score = 336 bits (861), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 242/372 (65%), Gaps = 34/372 (9%)
Query: 22 RVHEADVYSDQFDKIPDSVVLIILNKVADIRSLGRCSAVSKRFNSLVPIVEDVFVKIDKV 81
R+H D FD +PDS++L+I N + D+++LGRCS VSKRF+SL+P VE+VFV++D V
Sbjct: 14 RIHPEPQEIDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCV 73
Query: 82 VTIDGDEDESLYPSQTPPSFFSN--FLNLIFTILKPFHHLHRNDENQSIFPQVSRH---- 135
++ D ++ + L+F L+ + + S+ S
Sbjct: 74 ISDDDSSSLLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLI 133
Query: 136 -------------TSHTPDQVLKNFNHIRNLRIELPCGGVGTEDGVLLKWKAEFGSTLQN 182
T H+P QVLKNF+ I+ L+IELP G +G +DGVLLKW+AEFGSTL+N
Sbjct: 134 SGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLEN 193
Query: 183 CVVLGGTQIERKLITDQR--------SLEDNGSIPESFYTNGGLKLRVVWTISSLIAAST 234
CV+LG + + +D+ ++EDNGSIPESFYTNGGLKLRVVWTISSLIAAS
Sbjct: 194 CVILGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASA 253
Query: 235 WHYLLQPIIKDHPSLESVVLTDADGQGTLSMGKEQLREFRENPLTASASSRRTQVPASSM 294
HYLLQPII +H +L+S+VLTD DGQG L M ++QL E R PL+AS++S+RT VPA +M
Sbjct: 254 RHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNM 313
Query: 295 KLRYAPYLELPEGMVLQGATLVAIKPSGESSGRSKKEVD--SFISGAFDGSFKAVAKALS 352
+L YAP LELP+G VL+GATLVAI+PS SKKEV S++S AFD + AK L
Sbjct: 314 RLWYAPSLELPDGTVLKGATLVAIRPS-----ESKKEVCDVSWVSSAFDEPYGVAAKMLV 368
Query: 353 KRRTYLLEMNGF 364
KRRTY LEMN F
Sbjct: 369 KRRTYCLEMNSF 380
>AT4G18380.1 | F-box family protein | Chr4:10157957-10159099 FORWARD
LENGTH=380 | 201606
Length = 380
Score = 336 bits (861), Expect = e-113, Method: Compositional matrix adjust.
Identities = 185/372 (49%), Positives = 242/372 (65%), Gaps = 34/372 (9%)
Query: 22 RVHEADVYSDQFDKIPDSVVLIILNKVADIRSLGRCSAVSKRFNSLVPIVEDVFVKIDKV 81
R+H D FD +PDS++L+I N + D+++LGRCS VSKRF+SL+P VE+VFV++D V
Sbjct: 14 RIHPEPQEIDHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCV 73
Query: 82 VTIDGDEDESLYPSQTPPSFFSN--FLNLIFTILKPFHHLHRNDENQSIFPQVSRH---- 135
++ D ++ + L+F L+ + + S+ S
Sbjct: 74 ISDDDSSSLLSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLI 133
Query: 136 -------------TSHTPDQVLKNFNHIRNLRIELPCGGVGTEDGVLLKWKAEFGSTLQN 182
T H+P QVLKNF+ I+ L+IELP G +G +DGVLLKW+AEFGSTL+N
Sbjct: 134 SGGDDGEIEQGGVTHHSPTQVLKNFDEIKFLKIELPSGELGIDDGVLLKWRAEFGSTLEN 193
Query: 183 CVVLGGTQIERKLITDQR--------SLEDNGSIPESFYTNGGLKLRVVWTISSLIAAST 234
CV+LG + + +D+ ++EDNGSIPESFYTNGGLKLRVVWTISSLIAAS
Sbjct: 194 CVILGASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGGLKLRVVWTISSLIAASA 253
Query: 235 WHYLLQPIIKDHPSLESVVLTDADGQGTLSMGKEQLREFRENPLTASASSRRTQVPASSM 294
HYLLQPII +H +L+S+VLTD DGQG L M ++QL E R PL+AS++S+RT VPA +M
Sbjct: 254 RHYLLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSASKRTLVPALNM 313
Query: 295 KLRYAPYLELPEGMVLQGATLVAIKPSGESSGRSKKEVD--SFISGAFDGSFKAVAKALS 352
+L YAP LELP+G VL+GATLVAI+PS SKKEV S++S AFD + AK L
Sbjct: 314 RLWYAPSLELPDGTVLKGATLVAIRPS-----ESKKEVCDVSWVSSAFDEPYGVAAKMLV 368
Query: 353 KRRTYLLEMNGF 364
KRRTY LEMN F
Sbjct: 369 KRRTYCLEMNSF 380
>AT5G46170.1 | F-box family protein | Chr5:18715638-18716825 REVERSE
LENGTH=395 | 201606
Length = 395
Score = 324 bits (831), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/378 (49%), Positives = 243/378 (64%), Gaps = 51/378 (13%)
Query: 31 DQFDKIPDSVVLIILNKVADIRSLGRCSAVSKRFNSLVPIVEDVFVKIDKVVTIDGDEDE 90
D FD +PDS++L++ NK+ D+++LGRC VS+RF+SLVP V++V V++D V++ D
Sbjct: 25 DHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQVDNVVVRVDCVISDDDSSSL 84
Query: 91 SLYPSQTPPSFFSN---FLNLIFTILKPFHHLHR-------------------------N 122
S S++ S S F ++ I+KP L + +
Sbjct: 85 SSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKRSSSSCGGSGSSSSSLSISGD 144
Query: 123 DENQSIFPQVSRHTSHTPDQVLKNFNHIRNLRIELPCGGVGTEDGVLLKWKAEFGSTLQN 182
D+ I + T H+P QVLKNF+ IR LRIELP G +G +DGVLLKW+AEFGSTL N
Sbjct: 145 DDGGEI--EQGGVTHHSPTQVLKNFDEIRYLRIELPSGELGIDDGVLLKWRAEFGSTLDN 202
Query: 183 CVVLGGTQI------ERKLITDQRSL--------EDNGSIPESFYTNGGLKLRVVWTISS 228
CV+LG + + D ++ +DNGSIPESFYTNGGLKLRVVWTISS
Sbjct: 203 CVILGASSVIPPNPMRVSQACDTTTVVEAPGSGSDDNGSIPESFYTNGGLKLRVVWTISS 262
Query: 229 LIAASTWHYLLQPIIKDHPSLESVVLTDADGQGTLSMGKEQLREFRENPLTASASSRRTQ 288
LIAAS HYLLQPII +H +L+S+VLTD+DGQG L M ++QL E R PL AS++S+RT
Sbjct: 263 LIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGVLCMNRDQLEELRVKPLAASSASKRTL 322
Query: 289 VPASSMKLRYAPYLELPEGMVLQGATLVAIKPSGESSGRSKKEVD--SFISGAFDGSFKA 346
VPA +M+L YAP LELP+G VL+GATLVAI+PS SKKEV S++S AF+ ++
Sbjct: 323 VPALNMRLWYAPTLELPDGTVLKGATLVAIRPS-----ESKKEVSDISWVSSAFEEPYET 377
Query: 347 VAKALSKRRTYLLEMNGF 364
AK L KRRTY LEMN F
Sbjct: 378 AAKMLVKRRTYCLEMNSF 395
>AT1G30200.2 | F-box family protein | Chr1:10625147-10626286 FORWARD
LENGTH=379 | 201606
Length = 379
Score = 320 bits (821), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 241/366 (65%), Gaps = 42/366 (11%)
Query: 31 DQFDKIPDSVVLIILNKVADIRSLGRCSAVSKRFNSLVPIVEDVFVKIDKVVTIDGD--- 87
D FD +PDS++L+I +KVAD++ LGRC VS+RF+SLVP VE+V V++D V++ D
Sbjct: 24 DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83
Query: 88 --------EDESLYPSQTPPSFFSNFLNLIFT-ILKPFHHLHRNDENQSIFPQVSRH--- 135
S+ + FS L+F I KPF L Q + P+ S
Sbjct: 84 DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQML-----GQILGPKRSSSSFD 138
Query: 136 ------------TSHTPDQVLKNFNHIRNLRIELPCGGVGTEDGVLLKWKAEFGSTLQNC 183
T H+P QVLKNF IR L+IELP G +G EDG+LLKW+A+FGSTL NC
Sbjct: 139 ASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNC 198
Query: 184 VVLGGTQI--ERKLITDQRSL-EDNGSIPESFYTNGGLKLRVVWTISSLIAASTWHYLLQ 240
++LG + + + + S+ EDNG+IPESFYTNGGLKLRVVWTISSLIAAS HYLLQ
Sbjct: 199 MILGASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 258
Query: 241 PIIKDHPSLESVVLTDADGQGTLSMGKEQLREFRENPLTASASSRRTQVPASSMKLRYAP 300
PII +H SL+ +VL+DADGQG L M +EQL E R PL+AS++S+RT VPA +M+L YAP
Sbjct: 259 PIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAP 318
Query: 301 YLELPEGMVLQGATLVAIKPSGESSGRSKKEV--DSFISGAFDGSFKAVAKALSKRRTYL 358
L+LP+G VL+GATLVAI+PS SKKEV S++S AF+ F VAK L KRRTY
Sbjct: 319 ELDLPDGTVLKGATLVAIRPS-----ESKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYC 373
Query: 359 LEMNGF 364
LEMN F
Sbjct: 374 LEMNSF 379
>AT1G30200.1 | F-box family protein | Chr1:10625147-10626286 FORWARD
LENGTH=379 | 201606
Length = 379
Score = 320 bits (821), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/366 (51%), Positives = 241/366 (65%), Gaps = 42/366 (11%)
Query: 31 DQFDKIPDSVVLIILNKVADIRSLGRCSAVSKRFNSLVPIVEDVFVKIDKVVTIDGD--- 87
D FD +PDS++L+I +KVAD++ LGRC VS+RF+SLVP VE+V V++D V++ D
Sbjct: 24 DHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVISDDDSSSS 83
Query: 88 --------EDESLYPSQTPPSFFSNFLNLIFT-ILKPFHHLHRNDENQSIFPQVSRH--- 135
S+ + FS L+F I KPF L Q + P+ S
Sbjct: 84 DENHRFSLNTASISDAGGAGGSFSALFRLVFAPIFKPFQML-----GQILGPKRSSSSFD 138
Query: 136 ------------TSHTPDQVLKNFNHIRNLRIELPCGGVGTEDGVLLKWKAEFGSTLQNC 183
T H+P QVLKNF IR L+IELP G +G EDG+LLKW+A+FGSTL NC
Sbjct: 139 ASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPTGELGIEDGILLKWRADFGSTLDNC 198
Query: 184 VVLGGTQI--ERKLITDQRSL-EDNGSIPESFYTNGGLKLRVVWTISSLIAASTWHYLLQ 240
++LG + + + + S+ EDNG+IPESFYTNGGLKLRVVWTISSLIAAS HYLLQ
Sbjct: 199 MILGASSVIQSNSVKNHENSVDEDNGNIPESFYTNGGLKLRVVWTISSLIAASARHYLLQ 258
Query: 241 PIIKDHPSLESVVLTDADGQGTLSMGKEQLREFRENPLTASASSRRTQVPASSMKLRYAP 300
PII +H SL+ +VL+DADGQG L M +EQL E R PL+AS++S+RT VPA +M+L YAP
Sbjct: 259 PIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSASKRTLVPALNMRLWYAP 318
Query: 301 YLELPEGMVLQGATLVAIKPSGESSGRSKKEV--DSFISGAFDGSFKAVAKALSKRRTYL 358
L+LP+G VL+GATLVAI+PS SKKEV S++S AF+ F VAK L KRRTY
Sbjct: 319 ELDLPDGTVLKGATLVAIRPS-----ESKKEVCDASWLSDAFEEPFGTVAKMLIKRRTYC 373
Query: 359 LEMNGF 364
LEMN F
Sbjct: 374 LEMNSF 379