BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0490.1
(274 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G19950.1 | RING/U-box superfamily protein | Chr3:6942853-6943... 85 6e-19
AT3G19950.3 | RING/U-box superfamily protein | Chr3:6942679-6943... 85 1e-18
AT3G19950.2 | RING/U-box superfamily protein | Chr3:6942679-6943... 85 1e-18
AT3G46620.1 | zinc finger (C3HC4-type RING finger) family protei... 83 9e-18
AT1G21960.1 | RING/U-box superfamily protein | Chr1:7725972-7726... 79 2e-17
>AT3G19950.1 | RING/U-box superfamily protein | Chr3:6942853-6943839
FORWARD LENGTH=328 | 201606
Length = 328
Score = 85.1 bits (209), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 16 LCDRRVWLEKEDQTETTSSSSSSSSSNFLFDIEIYKKTQWII------RSPENQEQIFVY 69
+C++ E ED S + + +SS+ F + T + +P + + ++
Sbjct: 44 ICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLF 103
Query: 70 DESLEPDTTLLRFSLKPDTFKYRATLRRNIINRLYSLRIKNMNIRWEIIDTITSFATELA 129
S++P + + + D F L+ N L +LR T F +
Sbjct: 104 GPSMQPQARSTQQNPQSDAFDPFTFLQ----NHLQTLRSSG-----------THFEFVIE 148
Query: 130 NEETNKGQINKYLIRMDFLISDVYVRDAVSEMERALVES-INQINMVPASQSSIDKLEKI 188
N ++ G RM D + + ++ + L E+ N+ PAS+S+ID L +
Sbjct: 149 NHPSDPGN------RMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTV 202
Query: 189 EFHGEDSQLTTNTSCSVCLEEFEKGLVLAKLPCSHIFHSDCITQWLQTSHYCPICRFQMP 248
+ +D + C+VC++EFE G + ++PC H+FH DC+ WL+ + CP+CRF++P
Sbjct: 203 KVT-KDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 261
>AT3G19950.3 | RING/U-box superfamily protein | Chr3:6942679-6943839
FORWARD LENGTH=386 | 201606
Length = 386
Score = 85.1 bits (209), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 16 LCDRRVWLEKEDQTETTSSSSSSSSSNFLFDIEIYKKTQWII------RSPENQEQIFVY 69
+C++ E ED S + + +SS+ F + T + +P + + ++
Sbjct: 102 ICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLF 161
Query: 70 DESLEPDTTLLRFSLKPDTFKYRATLRRNIINRLYSLRIKNMNIRWEIIDTITSFATELA 129
S++P + + + D F L+ N L +LR T F +
Sbjct: 162 GPSMQPQARSTQQNPQSDAFDPFTFLQ----NHLQTLRSSG-----------THFEFVIE 206
Query: 130 NEETNKGQINKYLIRMDFLISDVYVRDAVSEMERALVES-INQINMVPASQSSIDKLEKI 188
N ++ G RM D + + ++ + L E+ N+ PAS+S+ID L +
Sbjct: 207 NHPSDPGN------RMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTV 260
Query: 189 EFHGEDSQLTTNTSCSVCLEEFEKGLVLAKLPCSHIFHSDCITQWLQTSHYCPICRFQMP 248
+ +D + C+VC++EFE G + ++PC H+FH DC+ WL+ + CP+CRF++P
Sbjct: 261 KVT-KDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 319
>AT3G19950.2 | RING/U-box superfamily protein | Chr3:6942679-6943839
FORWARD LENGTH=386 | 201606
Length = 386
Score = 85.1 bits (209), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 29/240 (12%)
Query: 16 LCDRRVWLEKEDQTETTSSSSSSSSSNFLFDIEIYKKTQWII------RSPENQEQIFVY 69
+C++ E ED S + + +SS+ F + T + +P + + ++
Sbjct: 102 ICNQGFLEEYEDPNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLF 161
Query: 70 DESLEPDTTLLRFSLKPDTFKYRATLRRNIINRLYSLRIKNMNIRWEIIDTITSFATELA 129
S++P + + + D F L+ N L +LR T F +
Sbjct: 162 GPSMQPQARSTQQNPQSDAFDPFTFLQ----NHLQTLRSSG-----------THFEFVIE 206
Query: 130 NEETNKGQINKYLIRMDFLISDVYVRDAVSEMERALVES-INQINMVPASQSSIDKLEKI 188
N ++ G RM D + + ++ + L E+ N+ PAS+S+ID L +
Sbjct: 207 NHPSDPGN------RMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTPPASKSAIDALPTV 260
Query: 189 EFHGEDSQLTTNTSCSVCLEEFEKGLVLAKLPCSHIFHSDCITQWLQTSHYCPICRFQMP 248
+ +D + C+VC++EFE G + ++PC H+FH DC+ WL+ + CP+CRF++P
Sbjct: 261 KVT-KDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELHNSCPVCRFELP 319
>AT3G46620.1 | zinc finger (C3HC4-type RING finger) family protein |
Chr3:17178837-17180024 REVERSE LENGTH=395 | 201606
Length = 395
Score = 82.8 bits (203), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 168 SINQINMVPASQSSIDKLEKIEFHGEDSQLTTNTSCSVCLEEFEKGLVLAKLPCSHIFHS 227
I + PAS+S+I+ L ++E D +C+VC E FE G+ ++PC HIFH
Sbjct: 182 GIGRSGNPPASKSAIESLPRVEI--SDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHG 239
Query: 228 DCITQWLQTSHYCPICRFQMP 248
DCI WL + CP+CRF++P
Sbjct: 240 DCIVPWLSIRNSCPVCRFELP 260
>AT1G21960.1 | RING/U-box superfamily protein | Chr1:7725972-7726586
FORWARD LENGTH=204 | 201606
Length = 204
Score = 78.6 bits (192), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 167 ESINQINMV-PASQSSIDKLEKIEFHGEDSQLTTNTSCSVCLEEFEKGLVLAKLPCSHIF 225
E+ N I ++ PA++ +D+L + ++ + + + C++CLEEFEKG ++ LPC H F
Sbjct: 121 ETTNNIELIRPANKLVVDRLARKVYNKKKKSNSDASVCTICLEEFEKGEIVVTLPCGHEF 180
Query: 226 HSDCITQWLQTSHYCPICRFQMP 248
CI +W H CP+CRF++P
Sbjct: 181 DDGCIGKWFLKDHVCPLCRFELP 203