BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000010.1_g0520.1
         (239 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ATMG00300.1 | Gag-Pol-related retrotransposon family protein | C...    46   3e-06

>ATMG00300.1 | Gag-Pol-related retrotransposon family protein |
           ChrM:89617-90054 REVERSE LENGTH=145 | 201606
          Length = 145

 Score = 46.2 bits (108), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 3/78 (3%)

Query: 14  ENSSTLWHRRLGHISIERVKRLVKDGVLKTLDFTDFGTCVDCIKGKQTNKT--SKGAKRS 71
           ++ + LWH RL H+S   ++ LVK G L +   +    C DCI GK T++   S G   +
Sbjct: 66  KDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGK-THRVNFSTGQHTT 124

Query: 72  SQILEIIHTDICGPFPTP 89
              L+ +H+D+ G    P
Sbjct: 125 KNPLDYVHSDLWGAPSVP 142

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