BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0600.1
(630 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 285 4e-84
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 285 4e-84
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 129 2e-34
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 99 6e-23
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 285 bits (729), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 280/515 (54%), Gaps = 71/515 (13%)
Query: 133 VESKTIPDHIAHFSVRHVLAPVHKVPLPSMA---EPTSYKTAIKDPNWKKAMEDEFQALM 189
V S TI D I+ F ++P++ L +A EP++Y A + W AM+DE A+
Sbjct: 52 VASLTIHD-ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAME 110
Query: 190 RNETWSLIPKTSDMNVLGCKWVFKVKYNSDGTIERYKARRVAQGYTQQESIDYVETFSPV 249
TW + + +GCKWV+K+KYNSDGTIERYKAR VA+GYTQQE ID++ETFSPV
Sbjct: 111 TTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPV 170
Query: 250 VKIQTVRVVLTVAISHHWPIQQLDVSNAFLHGHLTETVYMKQPRRFANPQC----PDFVC 305
K+ +V+++L ++ +++ + QLD+SNAFL+G L E +YMK P +A Q P+ VC
Sbjct: 171 CKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVC 230
Query: 306 HLHKALYGLKQAHRAWFTRFATYLQHWGFLRSASDTSMFVFTSAGQMMVLLIYVDDIILT 365
+L K++YGLKQA R WF +F+ L +GF++S SD + F+ +A + +L+YVDDII+
Sbjct: 231 YLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIIC 290
Query: 366 DTSASLLDQLFATLAEEFAMKRLGNINYFLGIEVQRTPSSLLLTQTKYTLELLDKSGLSD 425
+ + +D+L + L F ++ LG + YFLG+E+ R+ + + + Q KY L+LLD++GL
Sbjct: 291 SNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLG 350
Query: 426 SKPSLVPIS----------------------VGK----RVSKMD---------------G 444
KPS VP+ +G+ +++++D
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 445 IAIKSGDLSILQGYSDSDWAGCPDTRRSTSGYCVFLGSSLVSWSSKKQAT---------- 494
+A + + IL + G + ++ VF +S S +++T
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 495 -VSRSSTEAEYRALSMATSELLWLSYLLEE----------LGVSITAQLRLSCDNMGAKY 543
+S S + + + S A +E LS+ +E L + ++ L CDN A +
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530
Query: 544 LASNPVFHARTKHIEIDYHFIRDL-VVSSTLEINF 577
+A+N VFH RTKHIE D H +R+ V +TL +F
Sbjct: 531 IATNAVFHERTKHIESDCHSVRERSVYQATLSYSF 565
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 285 bits (729), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 177/515 (34%), Positives = 280/515 (54%), Gaps = 71/515 (13%)
Query: 133 VESKTIPDHIAHFSVRHVLAPVHKVPLPSMA---EPTSYKTAIKDPNWKKAMEDEFQALM 189
V S TI D I+ F ++P++ L +A EP++Y A + W AM+DE A+
Sbjct: 52 VASLTIHD-ISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAME 110
Query: 190 RNETWSLIPKTSDMNVLGCKWVFKVKYNSDGTIERYKARRVAQGYTQQESIDYVETFSPV 249
TW + + +GCKWV+K+KYNSDGTIERYKAR VA+GYTQQE ID++ETFSPV
Sbjct: 111 TTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPV 170
Query: 250 VKIQTVRVVLTVAISHHWPIQQLDVSNAFLHGHLTETVYMKQPRRFANPQC----PDFVC 305
K+ +V+++L ++ +++ + QLD+SNAFL+G L E +YMK P +A Q P+ VC
Sbjct: 171 CKLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVC 230
Query: 306 HLHKALYGLKQAHRAWFTRFATYLQHWGFLRSASDTSMFVFTSAGQMMVLLIYVDDIILT 365
+L K++YGLKQA R WF +F+ L +GF++S SD + F+ +A + +L+YVDDII+
Sbjct: 231 YLKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIIC 290
Query: 366 DTSASLLDQLFATLAEEFAMKRLGNINYFLGIEVQRTPSSLLLTQTKYTLELLDKSGLSD 425
+ + +D+L + L F ++ LG + YFLG+E+ R+ + + + Q KY L+LLD++GL
Sbjct: 291 SNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLG 350
Query: 426 SKPSLVPIS----------------------VGK----RVSKMD---------------G 444
KPS VP+ +G+ +++++D
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 445 IAIKSGDLSILQGYSDSDWAGCPDTRRSTSGYCVFLGSSLVSWSSKKQAT---------- 494
+A + + IL + G + ++ VF +S S +++T
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 495 -VSRSSTEAEYRALSMATSELLWLSYLLEE----------LGVSITAQLRLSCDNMGAKY 543
+S S + + + S A +E LS+ +E L + ++ L CDN A +
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530
Query: 544 LASNPVFHARTKHIEIDYHFIRDL-VVSSTLEINF 577
+A+N VFH RTKHIE D H +R+ V +TL +F
Sbjct: 531 IATNAVFHERTKHIESDCHSVRERSVYQATLSYSF 565
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 129 bits (323), Expect = 2e-34, Method: Composition-based stats.
Identities = 62/131 (47%), Positives = 86/131 (65%), Gaps = 10/131 (7%)
Query: 164 EPTSYKTAIKDPNWKKAMEDEFQALMRNETWSLIPKTSDMNVLGCKWVFKVKYNSDGTIE 223
EP S A+KDP W +AM++E AL RN+TW L+P + N+LGCKWVFK K +SDGT++
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 224 RYKARRVAQGYTQQESIDYVETFSPVVKIQTVRVVLTVAISHHWPIQQLDVS---NAFLH 280
R KAR VA+G+ Q+E I +VET+SPVV+ T+R +L VA QQL+V N
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVGQSINWMFK 139
Query: 281 GHLTETVYMKQ 291
H + ++ K+
Sbjct: 140 MHFSMGIFKKK 150
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 99.0 bits (245), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 103/226 (45%), Gaps = 63/226 (27%)
Query: 353 MVLLIYVDDIILTDTSASLLD----QLFATLA--------------------------EE 382
M LL+YVDDI+LT +S +LL+ QL +T + +
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 383 FAMKRLGNINYFLGIEVQRTPSSLLLTQTKYTLELLDKSGLSD----------------- 425
+A + L N L + TP L L + T + D S
Sbjct: 61 YAEQILNNAG-MLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 426 ---------SKPSLVPISVGKRVSK------MDGIAIKSGDLSILQGYSDSDWAGCPDTR 470
+P+L + KRV + G+ I +Q + DSDWAGC TR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 471 RSTSGYCVFLGSSLVSWSSKKQATVSRSSTEAEYRALSMATSELLW 516
RST+G+C FLG +++SWS+K+Q TVSRSSTE EYRAL++ +EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225