BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0690.1
(143 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G06270.2 | hypothetical protein | Chr5:1912895-1913263 FORWAR... 60 3e-12
AT5G06270.1 | hypothetical protein | Chr5:1912895-1913263 FORWAR... 60 3e-12
AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3667337-3667690... 59 6e-12
AT5G22270.1 | hypothetical protein | Chr5:7372487-7372768 REVERS... 50 6e-09
AT3G52561.1 | hypothetical protein | Chr3:19497188-19497487 REVE... 45 1e-06
>AT5G06270.2 | hypothetical protein | Chr5:1912895-1913263 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 59.7 bits (143), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 106 AMVLAGCPRCLMYVMLRKQNPRCPKCNNSTLLNFFN 141
+MVL GCPRCLMYVML + +P+CPKC ++ LL+F +
Sbjct: 65 SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLH 100
>AT5G06270.1 | hypothetical protein | Chr5:1912895-1913263 FORWARD
LENGTH=122 | 201606
Length = 122
Score = 59.7 bits (143), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%)
Query: 106 AMVLAGCPRCLMYVMLRKQNPRCPKCNNSTLLNFFN 141
+MVL GCPRCLMYVML + +P+CPKC ++ LL+F +
Sbjct: 65 SMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLH 100
>AT3G11600.1 | E3 ubiquitin-protein ligase | Chr3:3667337-3667690
FORWARD LENGTH=117 | 201606
Length = 117
Score = 58.9 bits (141), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 102 DGAGAMVLAGCPRCLMYVMLRKQNPRCPKCNNSTLLNFFN 141
+ +MVL GCPRCLMYVML +P+CPKC ++ LL+F
Sbjct: 55 ETITSMVLVGCPRCLMYVMLSDDDPKCPKCKSTVLLDFLQ 94
>AT5G22270.1 | hypothetical protein | Chr5:7372487-7372768 REVERSE
LENGTH=93 | 201606
Length = 93
Score = 50.4 bits (119), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 106 AMVLAGCPRCLMYVMLRKQN-PRCPKCNNSTLLNFFNGD 143
+MV+ GCP C+MY++ +N PRCP+CN+ LL+F G+
Sbjct: 48 SMVVVGCPNCIMYIITSLENDPRCPRCNSHVLLDFLTGN 86
>AT3G52561.1 | hypothetical protein | Chr3:19497188-19497487 REVERSE
LENGTH=99 | 201606
Length = 99
Score = 44.7 bits (104), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 102 DGAGAMVLAGCPRCLMYVMLRKQNPRCPKCNNSTLLNF 139
+ A MV+ GC C+MYVM+ ++ RCPKC + L+ F
Sbjct: 62 EEAPEMVVMGCRSCMMYVMVLQERQRCPKCKCTDLIFF 99