BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0700.1
(401 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 73 6e-14
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 66 2e-11
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 64 4e-11
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 60 9e-10
AT2G02103.1 | Ta11-like non-LTR retrotransposon | Chr2:530425-53... 60 9e-10
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 73.2 bits (178), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 12/173 (6%)
Query: 75 IKENLFLIRFATATELEMALDKSPWVVVDELIILQECDVNKAPGEHNFDFAWFWVQLHGI 134
+ + F +RF + +L L ++PWV + I LQ + P E F WV + GI
Sbjct: 73 LDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQRWE--DFPTEDFLTFIDVWVHIRGI 130
Query: 135 PISHLNSTIVNRLASTMGNFQPTT-PEDAAKWSLFGRVKVEFNILNP--FPKRVNLNTSN 191
P+ +++ V +AST+G E+ F RVKV + P F +RV +
Sbjct: 131 PLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRE 190
Query: 192 TQIVSVEIRVERLPRFCFSCGRIGHSINFCPIIVQFGDLLKLPLNDEQKALVS 244
++ E E+L R C +C R+ H ++ CP +V + +++E LVS
Sbjct: 191 RAMIGFE--YEKLQRVCTNCCRVNHQVSHCPYVVH-----QEEMDNEPDVLVS 236
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 102/232 (43%), Gaps = 23/232 (9%)
Query: 2 DPVNQHFIQRFKAL----TTEETPIHTVEGDVSDVSDFGINKSGVLKFMSVKKIDISVAM 57
D ++ F++ L +E P+ T+ +V + + K ++K + +I ISV +
Sbjct: 38 DVIDDEFVRERVGLEFPDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLG-SQIPISV-L 95
Query: 58 NRLSRVICGPNKFI-LTEIKENLFLIRFATATELEMALDKSPWVVVDELIILQECDVNKA 116
NR R + P+ + + ++ F+IRF E AL PW V+ +++Q+
Sbjct: 96 NRKLRELWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFD 155
Query: 117 PGEHNFDFAWFWVQLHGIPISHLNSTIVNRLASTMGNFQPTTPE------DAAKWSLFGR 170
P + WV+L IP ++ + ++ +A +G +P + D + F R
Sbjct: 156 PLRDDIVTTPVWVRLSNIPYNYYHRCLLMEIARGLG--RPLKVDMNTINFDKGR---FAR 210
Query: 171 VKVEFNILNPFPKRVNLNTSNTQIVSVEIRVERLPRFCFSCGRIGHSINFCP 222
V +E N+ P V +N + E L + C SCG GH ++ CP
Sbjct: 211 VCIEVNLAKPLKGTVLINGDRYFVA-----YEGLSKICSSCGIYGHLVHSCP 257
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 7/142 (4%)
Query: 84 FATATELEMALDKSPWVVVDELIILQECDVNKAPGEHNFDFAWFWVQLHGIPISHLNSTI 143
F LE L + PW D +I+LQ + P F F FWVQ+ GIP LN +
Sbjct: 177 FTLEESLETVLRRGPWAFNDWMILLQRWE----PQIPLFPFIPFWVQIRGIPFQFLNRGV 232
Query: 144 VNRLASTMGNFQPT--TPEDAAKWSLFGRVKVEFNILNPFPKRVNLNTSNTQIVSVEIRV 201
V + +G T E A+ F RV + ++I +P + + + + R
Sbjct: 233 VEHIGRALGQVLDTDFNVEVVARMD-FARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRY 291
Query: 202 ERLPRFCFSCGRIGHSINFCPI 223
ERL FC CG + H C I
Sbjct: 292 ERLRGFCEVCGMLTHDFGACLI 313
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 84 FATATELEMALDKSPWVVVDELIILQECDVNKAPGEHNFDFAWFWVQLHGIPISHLNSTI 143
FA +L M + PW+ + + V AP + WVQ+ GIP+ +++
Sbjct: 82 FANEIDLMMVQRREPWLFNNWFVAATRWQV--APAHNLVTTIDLWVQIRGIPLPYVSEET 139
Query: 144 VNRLASTMGNF------QPTTPEDAAKWSLFGRVKVEFNILNP--FPKRVNLNTSNTQIV 195
V +A +G + T+P+ A F RV+V F I + F +R+ ++ T
Sbjct: 140 VLEIAQDLGEIISLDFHEATSPQIA-----FIRVRVRFGITDRLRFFQRIIFDSGET--A 192
Query: 196 SVEIRVERLPRFCFSCGRIGHSINFCP 222
++ + ERL R C SC R H+ +CP
Sbjct: 193 TIRFQYERLRRLCSSCFRFTHNRAYCP 219
>AT2G02103.1 | Ta11-like non-LTR retrotransposon |
Chr2:530425-531636 REVERSE LENGTH=403 | 201606
Length = 403
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 17/147 (11%)
Query: 84 FATATELEMALDKSPWVVVDELIILQECDVNKAPGEHNFDFAWFWVQLHGIPISHLNSTI 143
FA +L M + PW+ + + V AP + WVQ+ GIP+ +++
Sbjct: 82 FANEIDLLMVQRREPWLFNNWFVAATRWQV--APAHNLVTTIDLWVQIRGIPLPYVSEET 139
Query: 144 VNRLASTMGNF------QPTTPEDAAKWSLFGRVKVEFNILNP--FPKRVNLNTSNTQIV 195
V +A +G + T+P+ A F RV+V F I + F +RV ++ T
Sbjct: 140 VMEIAHDLGEIISLDFHEATSPQIA-----FIRVRVRFGITDRLRFFQRVIFDSGET--A 192
Query: 196 SVEIRVERLPRFCFSCGRIGHSINFCP 222
++ + ERL R C SC R H+ +CP
Sbjct: 193 TIRFQYERLRRLCSSCFRFTHNRAYCP 219