BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0720.1
(194 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33140.1 | Ribosomal protein L6 family | Chr1:12023360-120245... 339 e-120
AT1G33120.1 | Ribosomal protein L6 family | Chr1:12010986-120122... 339 e-120
AT4G10450.1 | Ribosomal protein L6 family | Chr4:6463201-6464458... 330 e-117
AT4G10450.2 | Ribosomal protein L6 family | Chr4:6463837-6464458... 284 4e-99
>AT1G33140.1 | Ribosomal protein L6 family | Chr1:12023360-12024502
FORWARD LENGTH=194 | 201606
Length = 194
Score = 339 bits (869), Expect = e-120, Method: Compositional matrix adjust.
Identities = 161/193 (83%), Positives = 180/193 (93%)
Query: 1 MKLILSSDSMDIPDGVKIKVNAKIVEVEGPRGKLIKDFKHLNLDFHLIKNPETGKKKLKI 60
MK ILSS++MDIPD V IKV+AK++EVEGPRGKL++DFKHLNLDF LIK+PETGKKKLKI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 61 DSWFGSRKTSAAIRTALSHVSNLITGVTKGYRYKMRFVYAHFPINASITNGNRSIEIRNF 120
DSWFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI +SIEIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTILRSEKVKDELVLDGNDVELVSRSCALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGVTI+RSEKVKDE+VLDGND+ELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKGAVAEE 193
GIYVSEK + EE
Sbjct: 181 GIYVSEKSKIVEE 193
>AT1G33120.1 | Ribosomal protein L6 family | Chr1:12010986-12012223
FORWARD LENGTH=194 | 201606
Length = 194
Score = 339 bits (869), Expect = e-120, Method: Compositional matrix adjust.
Identities = 161/193 (83%), Positives = 180/193 (93%)
Query: 1 MKLILSSDSMDIPDGVKIKVNAKIVEVEGPRGKLIKDFKHLNLDFHLIKNPETGKKKLKI 60
MK ILSS++MDIPD V IKV+AK++EVEGPRGKL++DFKHLNLDF LIK+PETGKKKLKI
Sbjct: 1 MKTILSSETMDIPDSVTIKVHAKVIEVEGPRGKLVRDFKHLNLDFQLIKDPETGKKKLKI 60
Query: 61 DSWFGSRKTSAAIRTALSHVSNLITGVTKGYRYKMRFVYAHFPINASITNGNRSIEIRNF 120
DSWFG+RKTSA+IRTALSHV NLI+GVT+G+RYKMRFVYAHFPINASI +SIEIRNF
Sbjct: 61 DSWFGTRKTSASIRTALSHVDNLISGVTRGFRYKMRFVYAHFPINASIGGDGKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTILRSEKVKDELVLDGNDVELVSRSCALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGVTI+RSEKVKDE+VLDGND+ELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVTIVRSEKVKDEIVLDGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKGAVAEE 193
GIYVSEK + EE
Sbjct: 181 GIYVSEKSKIVEE 193
>AT4G10450.1 | Ribosomal protein L6 family | Chr4:6463201-6464458
REVERSE LENGTH=194 | 201606
Length = 194
Score = 330 bits (847), Expect = e-117, Method: Compositional matrix adjust.
Identities = 157/193 (81%), Positives = 177/193 (91%)
Query: 1 MKLILSSDSMDIPDGVKIKVNAKIVEVEGPRGKLIKDFKHLNLDFHLIKNPETGKKKLKI 60
MK ILSS++MDIPDGV IKVNAK++EVEGPRGKL +DFKHLNLDF LIK+ TGK++LKI
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 61 DSWFGSRKTSAAIRTALSHVSNLITGVTKGYRYKMRFVYAHFPINASITNGNRSIEIRNF 120
DSWFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI N+SIEIRNF
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTILRSEKVKDELVLDGNDVELVSRSCALINQKCHVKNKDIRKFLD 180
LGEKKVRKV+MLDGV I+RSEKVKDE++L+GND+ELVSRSCALINQKCHVK KDIRKFLD
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQKCHVKKKDIRKFLD 180
Query: 181 GIYVSEKGAVAEE 193
GIYVSEKG +A E
Sbjct: 181 GIYVSEKGKIAVE 193
>AT4G10450.2 | Ribosomal protein L6 family | Chr4:6463837-6464458
REVERSE LENGTH=175 | 201606
Length = 175
Score = 284 bits (727), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 134/166 (80%), Positives = 153/166 (92%)
Query: 1 MKLILSSDSMDIPDGVKIKVNAKIVEVEGPRGKLIKDFKHLNLDFHLIKNPETGKKKLKI 60
MK ILSS++MDIPDGV IKVNAK++EVEGPRGKL +DFKHLNLDF LIK+ TGK++LKI
Sbjct: 1 MKTILSSETMDIPDGVAIKVNAKVIEVEGPRGKLTRDFKHLNLDFQLIKDQVTGKRQLKI 60
Query: 61 DSWFGSRKTSAAIRTALSHVSNLITGVTKGYRYKMRFVYAHFPINASITNGNRSIEIRNF 120
DSWFGSRKTSA+IRTALSHV NLI GVT+G+ Y+MRFVYAHFPINASI N+SIEIRNF
Sbjct: 61 DSWFGSRKTSASIRTALSHVDNLIAGVTQGFLYRMRFVYAHFPINASIDGNNKSIEIRNF 120
Query: 121 LGEKKVRKVDMLDGVTILRSEKVKDELVLDGNDVELVSRSCALINQ 166
LGEKKVRKV+MLDGV I+RSEKVKDE++L+GND+ELVSRSCALINQ
Sbjct: 121 LGEKKVRKVEMLDGVKIVRSEKVKDEIILEGNDIELVSRSCALINQ 166