BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000010.1_g0750.1
(86 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G33520.1 | D111/G-patch domain-containing protein | Chr1:1215... 72 2e-16
AT4G25020.1 | D111/G-patch domain-containing protein | Chr4:1286... 65 6e-14
>AT1G33520.1 | D111/G-patch domain-containing protein |
Chr1:12157488-12158876 REVERSE LENGTH=462 | 201606
Length = 462
Score = 72.4 bits (176), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 4 EELMLKKFKEDIEKFPDDRGFDEFIDCPVEEFGKAILTGYGWKEGKGIGKNSKEEVKIVE 63
E+LML+ + D+ DD ++F PV+ FG A++ GYGWK GKGIGKN+KE+V+I E
Sbjct: 128 EQLMLQSLRRDLMSLADDPTLEDFESVPVDGFGAALMAGYGWKPGKGIGKNAKEDVEIKE 187
Query: 64 VVRRRRGEREGLGYD 78
++ +EGLG+D
Sbjct: 188 Y--KKWTAKEGLGFD 200
>AT4G25020.1 | D111/G-patch domain-containing protein |
Chr4:12860805-12861932 REVERSE LENGTH=375 | 201606
Length = 375
Score = 65.5 bits (158), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 44/61 (72%)
Query: 3 IEELMLKKFKEDIEKFPDDRGFDEFIDCPVEEFGKAILTGYGWKEGKGIGKNSKEEVKIV 62
+E+++LK + D+E PD ++F PV+ FG+A+L GYGWK G+GIG +KE+VKIV
Sbjct: 110 VEKMLLKSMRTDLESLPDAPEKEDFESFPVDGFGEALLAGYGWKPGQGIGLKAKEDVKIV 169
Query: 63 E 63
E
Sbjct: 170 E 170