BLAST Resut 
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000011.1_g0050.1
         (332 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G24580.1 | FAD-dependent oxidoreductase family protein | Chr2...   413   e-144

>AT2G24580.1 | FAD-dependent oxidoreductase family protein |
           Chr2:10444928-10446178 REVERSE LENGTH=416 | 201606
          Length = 416

 Score =  413 bits (1061), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 191/326 (58%), Positives = 243/326 (74%), Gaps = 1/326 (0%)

Query: 8   FDVIIVGAEIMGSCWAYQIAKRGEKVLLLEQFDFLHHLGSSHGESRTIRCTYPEDYYADM 67
           FDVI+VGA +MGS  AYQ+AKRG+K LLLEQFDFLHH GSSHGESRTIR TYPEDYY  M
Sbjct: 9   FDVIVVGAGVMGSSAAYQLAKRGQKTLLLEQFDFLHHRGSSHGESRTIRATYPEDYYYSM 68

Query: 68  TIESTKLWEDVESASGDKVYFKTRSSDMGPSDKKSLQEVIATCKSNLVPHKILDSTQVED 127
             EST+LW   +S  G KV+F T+  DMGP+D++SL  V+ATC+ + + H+++DS  V +
Sbjct: 69  VSESTRLWAAAQSEIGYKVHFPTQQFDMGPADQQSLLSVVATCQKHGLAHRVMDSHAVSE 128

Query: 128 EFSGIFRMPENWVGLLTQIGGVLRPTKAVSMFQTLATQNGAVLRDNMEVREINRDHERG- 186
            FSG   +PENW+G+ T++GG+++PTKAVSMFQTLA  +GA+LRDN +V  I RD E G 
Sbjct: 129 HFSGRISIPENWIGVSTELGGIIKPTKAVSMFQTLAIGHGAILRDNTKVANIKRDGESGE 188

Query: 187 AIRVCSKNGSKFWGKKCLVKVGAWMSKLVTTVTGQILPIQPLHTTISYWKIKDGFEEKIS 246
            + VC+  G KF+GKKC+V  GAW+SKLV TV G   P++PL TT+ YW+IK+G EEK +
Sbjct: 189 GVIVCTVKGDKFYGKKCIVTAGAWISKLVKTVAGIDFPVEPLETTVCYWRIKEGHEEKFT 248

Query: 247 VENGFPTFISYGEPFLYSTPSLEYPGLIKIALHDGYPCDPDKRTWVSTVIGNSLSSWVEE 306
           ++  FPTF SYG P++Y TPSLEYPGLIK+A+H GY CDPDKR W   V    L  W++E
Sbjct: 249 IDGEFPTFASYGAPYVYGTPSLEYPGLIKVAVHGGYWCDPDKRPWGPGVKLEELKEWIKE 308

Query: 307 QLSGRIESGEPVLTQSCMYSSTPDGD 332
           +  G ++S  PV TQ CMYS TPD D
Sbjct: 309 RFGGMVDSEGPVATQLCMYSMTPDED 334

Top