BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0030.1
(359 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G61870.1 | pentatricopeptide repeat 336 | Chr1:22865326-22866... 295 4e-97
AT1G11630.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 272 2e-88
AT4G36680.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 160 3e-45
AT3G13160.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 155 2e-43
AT3G13150.1 | Tetratricopeptide repeat (TPR)-like superfamily pr... 154 6e-42
>AT1G61870.1 | pentatricopeptide repeat 336 | Chr1:22865326-22866552
REVERSE LENGTH=408 | 201606
Length = 408
Score = 295 bits (754), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 170/408 (41%), Positives = 251/408 (61%), Gaps = 51/408 (12%)
Query: 1 MAPLSRIR--------LNSFIKSRYFSS---ILHRDYSTQPT-KQKPQDLNSLIDSENEP 48
MA LSRIR LN+ + R SS IL D T T K+K + SL+ SE +P
Sbjct: 1 MALLSRIRSSTSLFRHLNASPQIRSLSSASTILSPDSKTPLTSKEKSKAALSLLKSEKDP 60
Query: 49 EKILDICRTAFLNPNHHLDRTSFSNAMSKLKNYKSFHGIPSFLEE-LKSHPDLRNERFFS 107
++IL+ICR A L P+ +DR +FS A+ L K F + + L+ +++ PDL++ERF +
Sbjct: 61 DRILEICRAASLTPDCRIDRIAFSAAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAA 120
Query: 108 HVISLYGQSGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKL 167
H I LY Q+ ++DHS++ F+ +E+ ISR+ K+LN+LL AC++AK Y E RV++E PK+
Sbjct: 121 HAIVLYAQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKM 180
Query: 168 YNIKPDRDTYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLND 227
Y I+PD +TYN +I CESGS+SS Y I+ EM + KP++++F ++SGF+ E+K ++
Sbjct: 181 YGIEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDE 240
Query: 228 VEKVLEIMEKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLIT 287
V KVL +M+ + + VS YN++I+SLC+ +S EAK+L +GMLS G+KP + TY HLI
Sbjct: 241 VGKVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIH 300
Query: 288 GFCEEGNLEEAKRIFDIMPKKSCD------------------------------------ 311
GFC E + EEAK++F IM + C
Sbjct: 301 GFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVP 360
Query: 312 HFPTLKMLVDGLLSASKVDEAREVIREIK-KFTKN-DAWEEIEKALPQ 357
F +K LV+GL SKV+EA+E+I ++K KFT+N + W E+E ALPQ
Sbjct: 361 SFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNVELWNEVEAALPQ 408
>AT1G11630.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr1:3913168-3914385 REVERSE LENGTH=405 |
201606
Length = 405
Score = 272 bits (695), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 240/402 (59%), Gaps = 46/402 (11%)
Query: 1 MAPLSRIRLNSFI--KSRYF-----SSILHRDYSTQPTKQKPQDLNSLIDSENEPEKILD 53
MA L RIR + FI K+ F SS + S ++K +D SL+ SEN P++IL+
Sbjct: 1 MAFLFRIRTSEFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILE 60
Query: 54 ICRTAFLNPNHHLDRTSFSNAMSKLKNYKSFHGIPSFLEE-LKSHPDLRNERFFSHVISL 112
ICR+ L+P++H+DR FS A+ L K F + L+ +++ PD ++E F I L
Sbjct: 61 ICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIIL 120
Query: 113 YGQSGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKLYNIKP 172
YG++ ++D SI+TF+ +E+ I R+ K+LN+LL AC++AK Y E RV+LE PK+Y I+P
Sbjct: 121 YGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEP 180
Query: 173 DRDTYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLNDVEKVL 232
D +TYN +I LCESGS+SS Y I+ EM + KP +F ++ GF+KEEK ++V KV+
Sbjct: 181 DLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVM 240
Query: 233 EIMEKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLITGFCEE 292
+M++ + V+ YN+ I+ LC+ +S+EAK+L +G++S ++P S TY LI GFC E
Sbjct: 241 RMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSE 300
Query: 293 GNLEEAKRIFDIM------PKKSC------------------------------DHFPTL 316
NL+EA +F++M P C F +
Sbjct: 301 ENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVM 360
Query: 317 KMLVDGLLSASKVDEAREVIREIK-KFTKN-DAWEEIEKALP 356
K LV+GL S SKVDEA+E+I +K KFT+N D W E+E ALP
Sbjct: 361 KWLVNGLASRSKVDEAKELIAVVKEKFTRNVDLWNEVEAALP 402
>AT4G36680.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr4:17292479-17293717 REVERSE LENGTH=412 |
201606
Length = 412
Score = 160 bits (404), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 52/387 (13%)
Query: 16 RYFSSILHRDYSTQPTKQK--PQDLNSLIDSENEPEKILDICRTAFLNPNHHL-----DR 68
R F+S +T P+ K S + E++P+K L I + N + H R
Sbjct: 12 RRFASAAADGTTTAPSSGKISVSKAKSTLRKEHDPDKALKI----YANVSDHSASPVSSR 67
Query: 69 TSFSNAMSKLKNYKSFHGIPSFLEELKSHPDLRNERFFSHVISLYGQSGLIDHSIKTFQQ 128
+ + +L + F I + +E K+ P ++ E F+S +I YGQ+ + +H+++TF+Q
Sbjct: 68 YAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQASMFNHAMRTFEQ 127
Query: 129 MEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKLYN-IKPDRDTYNTVIMGLCES 187
M++ G RS + N+LL AC+ +K +D+V ++F E P+ YN I PD+ +Y +I C+S
Sbjct: 128 MDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDKISYGILIKSYCDS 187
Query: 188 GSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLNDVEKVLEIMEKQDLGNVVSIY 247
G+ I+ +M + T F TILS +K+ +L + + M K+ + Y
Sbjct: 188 GTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNEMVKKGCELDNAAY 247
Query: 248 NLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLITGFCEEGNLEEAKRIFDIMPK 307
N++I S + S K L E M S G+KP + +Y +L+T +CE G L+EAK++++ +
Sbjct: 248 NVRIMSAQKES-PERVKELIEEMSSMGLKPDTISYNYLMTAYCERGMLDEAKKVYEGLEG 306
Query: 308 KSCD------------------------------------HFPTLKMLVDGLLSASKVDE 331
+C F TLK LV GL+ K D+
Sbjct: 307 NNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHLVVGLVENKKRDD 366
Query: 332 AREVIREI-KKFTKN--DAWEEIEKAL 355
A+ +IR + KKF + +AW+++E+ L
Sbjct: 367 AKGLIRTVKKKFPPSFLNAWKKLEEEL 393
>AT3G13160.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr3:4229994-4231178 REVERSE LENGTH=394 |
201606
Length = 394
Score = 155 bits (392), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/350 (28%), Positives = 174/350 (49%), Gaps = 18/350 (5%)
Query: 1 MAPLSRIRL------NSFIKSRYFSSILHRDYSTQPTKQKPQDLNSLIDSENEP----EK 50
M+ LSR L ++ R+FS++ + P+ KP L +L++ E +P EK
Sbjct: 1 MSSLSRFLLRGNFSFSTHTNRRFFSAVTAA--AATPSPPKPS-LITLVNDERDPKFITEK 57
Query: 51 ILDICRTAFLNPNHHLDRTSFSNAMSKLKNYKSFHGIPSFLEELKSHPDLRNERFFSHVI 110
C+ + N + + + +L K F + LEE +P++ E F + +I
Sbjct: 58 FKKACQAEWFRKNIAV----YERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARII 113
Query: 111 SLYGQSGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKLYNI 170
+LYG+ G+ +++ K F +M E R+ + N+LL ACV +KK+D V +F E P +I
Sbjct: 114 NLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSI 173
Query: 171 KPDRDTYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLNDVEK 230
+PD +YNT+I GLC GS + ++ E+ KPD TF +L + + K + E+
Sbjct: 174 EPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQ 233
Query: 231 VLEIMEKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLITGFC 290
+ M ++++ + YN ++ L ++S E SLF+ + +KP T+ +I GF
Sbjct: 234 IWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFV 293
Query: 291 EEGNLEEAKRIFDIMPKKSCDHFP-TLKMLVDGLLSASKVDEAREVIREI 339
EG L+EA + + K C L+ + A ++ A E+ +EI
Sbjct: 294 SEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEI 343
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 114/282 (40%), Gaps = 46/282 (16%)
Query: 62 PNHHLDRT--SFSNAMSKLKNYKSFHGIPSFLEELKS----HPDLRNERFFSHVISLYGQ 115
P + RT SF+ ++ N K F + +EL PD+ + ++ +I
Sbjct: 133 PERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS---YNTLIKGLCG 189
Query: 116 SGLIDHSIKTFQQMEEMGISRSTKTLNSLLLACVLAKKYDEVTRVFLEFPKLYNIKPDRD 175
G ++ ++E G+ T N LL K++E +++ + N+K D
Sbjct: 190 KGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVE-KNVKRDIR 248
Query: 176 TYNTVIMGLCESGSSSSVYPILVEMGKNKCKPDTTTFRTILSGFFKEEKLNDVEKVLEIM 235
+YN ++GL S + + ++ N+ KPD TF ++ GF E KL+
Sbjct: 249 SYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLD--------- 299
Query: 236 EKQDLGNVVSIYNLKIKSLCRLSRSSEAKSLFEGMLSQGVKPTSKTYCHLITGFCEEGNL 295
EA + ++ + G +P + L+ C+ G+L
Sbjct: 300 --------------------------EAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDL 333
Query: 296 EEAKRIF-DIMPKKSCDHFPTLKMLVDGLLSASKVDEAREVI 336
E A + +I K+ L+ +VD L+ SK DEA E++
Sbjct: 334 ESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIV 375
>AT3G13150.1 | Tetratricopeptide repeat (TPR)-like superfamily
protein | Chr3:4227975-4229630 REVERSE LENGTH=551 |
201606
Length = 551
Score = 154 bits (389), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 161/321 (50%), Gaps = 10/321 (3%)
Query: 27 STQPTKQKPQDLNSLIDSENEP-----EKILDICRTAFLNPNHHLDRTSFSNAMSKLKNY 81
ST Q N DS+N EK C + H L +S + +L+
Sbjct: 45 STASVGDGGQSSNDAKDSKNSKLTQKVEKFKRSCESESFRQVHGL----YSAFIRRLREA 100
Query: 82 KSFHGIPSFLEELKSHPDLRNERFFSHVISLYGQSGLIDHSIKTFQQMEEMGISRSTKTL 141
K F I L+ K D+++E F ++ LYG SG+ +H+ K F +M E+ R+ K+
Sbjct: 101 KKFSTIDEVLQYQKKFDDIKSEDFVIRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSF 160
Query: 142 NSLLLACVLAKKYDEVTRVFLEFPKLYNIKPDRDTYNTVIMGLCESGSSSSVYPILVEMG 201
N+LL A V +KK DE + F E P+ I PD TYNT+I LC GS + I E+
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 202 KNKCKPDTTTFRTILSGFFKEEKLNDVEKVLEIMEKQDLGNVVSIYNLKIKSLCRLSRSS 261
KN +PD +F T+L F++ E + +++ ++M+ ++L + YN +++ L R + +
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFT 280
Query: 262 EAKSLFEGMLSQGVKPTSKTYCHLITGFCEEGNLEEAKRIFDIMPKKS-CDHFPTLKMLV 320
+A +L + M ++G+ P TY LIT + + NLEE + ++ M +K T ML+
Sbjct: 281 DALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLI 340
Query: 321 DGLLSASKVDEAREVIREIKK 341
L +D A EV E K
Sbjct: 341 PLLCKKGDLDRAVEVSEEAIK 361