BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0040.1
(183 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G50900.1 | Ankyrin repeat family protein | Chr1:18866272-1886... 235 7e-80
>AT1G50900.1 | Ankyrin repeat family protein |
Chr1:18866272-18867014 FORWARD LENGTH=175 | 201606
Length = 175
Score = 235 bits (600), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 108/143 (75%), Positives = 124/143 (86%)
Query: 41 FLGIRKNMGCFNSPKIGPSNGSRTKCWFKFGKNGVDAEGAGIYGSQRREDFDRDDVEQYF 100
FLG R ++GPSNGSRT CWFKFGKNGVDAE AGIYGSQ R+DFDRDDVEQYF
Sbjct: 33 FLGTRNLKLRIRPARLGPSNGSRTTCWFKFGKNGVDAENAGIYGSQSRDDFDRDDVEQYF 92
Query: 101 NYMGMLAVEGSYDKMDALLNQNIHPVDILLLMAATEGDKPKIEELMRAGADYTVKDADGR 160
NYMGMLAVEG+Y KM+ALLN NIHPVDILL++AATEGD+PKIEEL++AGADY+VKDADGR
Sbjct: 93 NYMGMLAVEGTYSKMEALLNLNIHPVDILLMLAATEGDRPKIEELLKAGADYSVKDADGR 152
Query: 161 TALDRAASNEIKEFIVGFSVQKA 183
TA+DRA S EI++ I+G+S QKA
Sbjct: 153 TAIDRANSEEIRDLILGYSTQKA 175