BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0060.1
(226 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G05190.1 | Ribosomal protein L6 family | Chr1:1502515-1503738... 349 e-123
AT2G18400.1 | ribosomal protein L6 family protein | Chr2:7989665... 86 2e-21
>AT1G05190.1 | Ribosomal protein L6 family | Chr1:1502515-1503738
REVERSE LENGTH=223 | 201606
Length = 223
Score = 349 bits (895), Expect = e-123, Method: Compositional matrix adjust.
Identities = 171/226 (75%), Positives = 195/226 (86%), Gaps = 3/226 (1%)
Query: 1 MASSVTTSFSSCNLRSGFFGELSEMRVASVPVSRVGFLRKGIECKESRIGKNPIEVPSNV 60
MASS+ +SF RS F G+ + +V+S P ++VG+ K IECKESRIGK PI VPSNV
Sbjct: 1 MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNV 57
Query: 61 TILLEGQDLKVKGPLGELSRTYPREVKVEKVESGQLRVSKAMDTRRANQMHGLFRTLTDN 120
TI LEGQDLKVKGPLGEL+ TYPREV++ K ESG LRV K ++TRRANQMHGLFRTLTDN
Sbjct: 58 TIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFRTLTDN 117
Query: 121 MVVGVSKGFEKKLQLIGVGYRAMLENKDLVLNLGFSHPVKMEIPDGIQVKVEENTRITVS 180
MVVGVSKGFEKKL L+GVGYRA ++ K+LVLNLGFSHPVKM+IPD ++VKVEENTRITVS
Sbjct: 118 MVVGVSKGFEKKLILVGVGYRATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVS 177
Query: 181 GYDKCAIGQFAASIRKWRPPEPYKGKGVKYADEIVRRKEGKAGKKK 226
GYDK IGQFAA++RKWRPPEPYKGKGVKY+DEIVRRKEGKAGKKK
Sbjct: 178 GYDKSEIGQFAATVRKWRPPEPYKGKGVKYSDEIVRRKEGKAGKKK 223
>AT2G18400.1 | ribosomal protein L6 family protein |
Chr2:7989665-7989973 REVERSE LENGTH=102 | 201606
Length = 102
Score = 85.5 bits (210), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 129 FEKKLQLIGVGYRAMLEN--KDLVLNLGFSHPVKMEIPDGIQVKVEENTRITVSGYDKCA 186
F + L+++GVGY+A E + L L LG+SH V++ +P ++V +N + +G DK
Sbjct: 5 FFRFLKIVGVGYKARAEEAGRFLYLKLGYSHEVELAVPPAVRVFCFKNNVVCCTGIDKQR 64
Query: 187 IGQFAASIRKWRPPEPYKGKGVKYADEIV 215
+ QFAA++R +PPEPYKGKG+ Y DE+V
Sbjct: 65 VHQFAATVRSCKPPEPYKGKGIMYTDEVV 93