BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000016.1_g0070.1
(69 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14145.1 | cytochrome C oxidase assembly protein | Chr4:81524... 106 2e-31
>AT4G14145.1 | cytochrome C oxidase assembly protein |
Chr4:8152499-8153091 REVERSE LENGTH=134 | 201606
Length = 134
Score = 106 bits (265), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 51/67 (76%), Positives = 59/67 (88%)
Query: 1 KDVAKVKDDHEWEIIETREALSRTGPVNLYKPKKISLEDELKAFKEKVDIDNYEYKKIPK 60
KD+AKVKDD EWEIIETR+ALSRTGPV+ YKPK S+EDELKA +EKVDI+ YEYKKIPK
Sbjct: 68 KDIAKVKDDQEWEIIETRKALSRTGPVDAYKPKNTSIEDELKAMQEKVDINTYEYKKIPK 127
Query: 61 PNEIKAN 67
NE K++
Sbjct: 128 LNESKSS 134