BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000017.1_g0040.1
(353 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G33160.1 | F-box family protein | Chr4:15994160-15995533 FORW... 78 1e-15
AT4G33160.2 | F-box family protein | Chr4:15993977-15995533 FORW... 78 2e-15
>AT4G33160.1 | F-box family protein | Chr4:15994160-15995533 FORWARD
LENGTH=457 | 201606
Length = 457
Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 1 MIESILVLLPMIDIFNHCKFVCKRWKAIIESKSFSVALGEALDRRPWICIYDHFSASFTI 60
++E +L LP F VCKRWK+ SKSF +A + R PW + D+ S S +
Sbjct: 74 VLERVLSWLP-TSCFFRMSSVCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSF 132
Query: 61 RDMMVLENYFPLKSIA----SKRHFVPFASPMGLM--------GFHLKGPLSTIYCSFTL 108
++ L ++ F+P AS GL+ F L+ PL+ S +
Sbjct: 133 VFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTG--SSRDI 190
Query: 109 PKW-FLDVKGTRALAIHGESR--SKYQTFMLYGIWPDLNMKTFTLEDENKNYWIEMPLEK 165
P + K +A+A+ + S Y + G P+L+ K + + N + W + +
Sbjct: 191 PSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIY---ESNADSWSKDQELE 247
Query: 166 SIVENKLNCHPDYDMPLKT-------------------------GVTVTCSDGCVMVYYL 200
S+ N + H DYD T +T +D +VY+L
Sbjct: 248 SVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYFL 307
Query: 201 TVRGRLICYDSRKCRIVVYPSLVDHKKVYG-DLVNCGGKLYAAVLLEGFFQYHWTLSVWE 259
+ G ++ D K P L+ Y DLV C G +Y +LL FF+ +L +W
Sbjct: 308 SSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMY-VILLSEFFESA-SLRIWR 365
Query: 260 FDSGKEEWKLISTVQPNMFQD-YNDTGHVTLHCSGYGDYIVVCINFS 305
D+ + EW + + P + + Y G + G G+ I+VC N S
Sbjct: 366 LDNNR-EWVQVGMLPPALSHELYGKKGDINC-VGGAGNKILVCFNAS 410
>AT4G33160.2 | F-box family protein | Chr4:15993977-15995533 FORWARD
LENGTH=518 | 201606
Length = 518
Score = 77.8 bits (190), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 144/347 (41%), Gaps = 52/347 (14%)
Query: 1 MIESILVLLPMIDIFNHCKFVCKRWKAIIESKSFSVALGEALDRRPWICIYDHFSASFTI 60
++E +L LP F VCKRWK+ SKSF +A + R PW + D+ S S +
Sbjct: 135 VLERVLSWLPTSCFFRMSS-VCKRWKSSQTSKSFKLACSQIPTRDPWFFMIDNDSNSSSF 193
Query: 61 RDMMVLENYFPLKSIA----SKRHFVPFASPMGLM--------GFHLKGPLSTIYCSFTL 108
++ L ++ F+P AS GL+ F L+ PL+ S +
Sbjct: 194 VFDSTENSWKNLNRRDFLHHHRQDFIPVASSGGLLCYRCSISGDFLLRNPLTG--SSRDI 251
Query: 109 PKW-FLDVKGTRALAIHGESR--SKYQTFMLYGIWPDLNMKTFTLEDENKNYWIEMPLEK 165
P + K +A+A+ + S Y + G P+L+ K + + N + W + +
Sbjct: 252 PSQDNNNNKPLQAVAMTTTTVTPSSYTLVTISGEIPNLSFKIY---ESNADSWSKDQELE 308
Query: 166 SIVENKLNCHPDYDMPLKT-------------------------GVTVTCSDGCVMVYYL 200
S+ N + H DYD T +T +D +VY+L
Sbjct: 309 SVKNNDSSLHDDYDTDSGTVYFLSKQGNVVVASNNLQRSPSKQYSSVITVTDEAEIVYFL 368
Query: 201 TVRGRLICYDSRKCRIVVYPSLVDHKKVYG-DLVNCGGKLYAAVLLEGFFQYHWTLSVWE 259
+ G ++ D K P L+ Y DLV C G +Y +LL FF+ +L +W
Sbjct: 369 SSYGTIVACDLTKRCFTELPKLLPPFLEYSIDLVECEGTMY-VILLSEFFE-SASLRIWR 426
Query: 260 FDSGKEEWKLISTVQPNMFQD-YNDTGHVTLHCSGYGDYIVVCINFS 305
D+ + EW + + P + + Y G + G G+ I+VC N S
Sbjct: 427 LDNNR-EWVQVGMLPPALSHELYGKKGDINC-VGGAGNKILVCFNAS 471