BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000020.1_g0010.1
(430 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWAR... 119 3e-29
AT4G12560.3 | F-box and associated interaction domains-containin... 94 2e-20
AT4G12560.2 | F-box and associated interaction domains-containin... 94 2e-20
AT4G12560.1 | F-box and associated interaction domains-containin... 94 2e-20
AT3G23880.1 | F-box and associated interaction domains-containin... 85 9e-18
>AT3G06240.1 | F-box family protein | Chr3:1887336-1888619 FORWARD
LENGTH=427 | 201606
Length = 427
Score = 119 bits (297), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 189/412 (45%), Gaps = 97/412 (23%)
Query: 76 ELPSPSSFSSPSPLISPLPLLLPSPSLSQSQSQSQLPISVSS------------------ 117
E SP S P +I+ + L LP+ S+ + + S+L ++SS
Sbjct: 27 EKASPESLVLPPEIITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRNESV 86
Query: 118 --------ISSQPYFQVDLPT-----SHVEAIEIDYPFK--------------------- 143
+SS + +D + + A+E +YP K
Sbjct: 87 RSLHRKLIVSSHNLYSLDFNSIGDGIRDLAAVEHNYPLKDDPSIFSEMIRNYVGDHLYDD 146
Query: 144 -----------YSRSNVELLGSCNGLVCIKWYKGEYLCVWNPFTNEYKEIPKQL---PTQ 189
Y R+ VE++GS NGLVCI +G ++NP T + K +P+ +
Sbjct: 147 RRVMLKLNAKSYRRNWVEIVGSSNGLVCISPGEGAVF-LYNPTTGDSKRLPENFRPKSVE 205
Query: 190 FPRDSRIHGINAYGFGCDCNNKNYKIVRIITSESEEYDSEVHVYTFESDCWTIIQPTPFG 249
+ RD+ YGFG D +YK+V+++ + + D+ V Y+ ++D W I +
Sbjct: 206 YERDN----FQTYGFGFDGLTDDYKLVKLVATSEDILDASV--YSLKADSWRRICNLNYE 259
Query: 250 TQE--RLRGMLVKGVLHFL---SKHTN-VIFSFDIISEIFYETPIPYLLED---PFAT-E 299
+ G+ G +H++ S+H V+ +FDI +E F E P+P ED F+
Sbjct: 260 HNDGSYTSGVHFNGAIHWVFTESRHNQRVVVAFDIQTEEFREMPVPDEAEDCSHRFSNFV 319
Query: 300 IGVLQGDLSLVGHCYQIRVDVWIMKDYGEKISWFKIFSINQPSVLRSLNYRRPIQICKNG 359
+G L G L +V CY + D+W+M +YGE SW +I IN + RS+ +P+ KN
Sbjct: 320 VGSLNGRLCVVNSCYDVHDDIWVMSEYGEAKSWSRI-RINL--LYRSM---KPLCSTKND 373
Query: 360 EILIEVIFQEEDDYGLVLYDPKTESGRLIKMCGS--TDGWNDVQDYVGTLVS 409
E EV+ + + D LVLY+ +T + + +CG +DG+ + YV +L+S
Sbjct: 374 E---EVLLELDGD--LVLYNFETNASSNLGICGVKLSDGF-EANTYVESLIS 419
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%)
Query: 1 MIANILSRLPVKPILRFRCVCKFWSNLTTDPNFIKMHLDQAIKN 44
+I IL RLP K I RFRCV K + L++DP F K+HLD ++N
Sbjct: 40 IITEILLRLPAKSIGRFRCVSKLFCTLSSDPGFAKIHLDLILRN 83
>AT4G12560.3 | F-box and associated interaction domains-containing
protein | Chr4:7441815-7443157 FORWARD LENGTH=413 |
201606
Length = 413
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 137 EIDYPFKYSRSNVELLGSCNGLVCIKWYKGEYLCVWNPFTNEYKEIPKQLPTQFPRDSRI 196
++++P K E+ GS NGL+ + + L V+NP T + +P P S
Sbjct: 78 DVEHPMKRG-GPTEVFGSSNGLIGLSNSPTD-LAVFNPSTRQIHRLPPS-SIDLPDGSST 134
Query: 197 HGINAYGFGCDCNNKNYKIVRI----ITSESE---EYDSEVHVYTFESDCWTIIQPTPFG 249
G YG G D + +YK+VR+ I SE E + EV V++ + + W I+
Sbjct: 135 RGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASS 194
Query: 250 TQ-----------ERLRGMLVKGVLHFLSKHT------NVIFSFDIISEIFYETPIPYLL 292
Q R G+L LH++ N+I FD+ E F P +
Sbjct: 195 IQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAV 254
Query: 293 ED---PFATEIGVLQGDLSLVGHCYQIRVDVWIMKDYGEKISWFKIFSINQPSVLRSLNY 349
+ +IGVL G L L+ + Q VDVW+MK+Y + SW K+F++ +P ++S +Y
Sbjct: 255 ANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSY 314
Query: 350 RRPIQICKNGEILIEVIFQEEDDYGLVLYD--PKTESGRLIKMCGST 394
RP+ K+ + + E ++ LV +D K S IK C S+
Sbjct: 315 MRPLVYSKDK----KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSS 357
>AT4G12560.2 | F-box and associated interaction domains-containing
protein | Chr4:7441815-7443157 FORWARD LENGTH=413 |
201606
Length = 413
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 137 EIDYPFKYSRSNVELLGSCNGLVCIKWYKGEYLCVWNPFTNEYKEIPKQLPTQFPRDSRI 196
++++P K E+ GS NGL+ + + L V+NP T + +P P S
Sbjct: 78 DVEHPMKRG-GPTEVFGSSNGLIGLSNSPTD-LAVFNPSTRQIHRLPPS-SIDLPDGSST 134
Query: 197 HGINAYGFGCDCNNKNYKIVRI----ITSESE---EYDSEVHVYTFESDCWTIIQPTPFG 249
G YG G D + +YK+VR+ I SE E + EV V++ + + W I+
Sbjct: 135 RGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASS 194
Query: 250 TQ-----------ERLRGMLVKGVLHFLSKHT------NVIFSFDIISEIFYETPIPYLL 292
Q R G+L LH++ N+I FD+ E F P +
Sbjct: 195 IQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAV 254
Query: 293 ED---PFATEIGVLQGDLSLVGHCYQIRVDVWIMKDYGEKISWFKIFSINQPSVLRSLNY 349
+ +IGVL G L L+ + Q VDVW+MK+Y + SW K+F++ +P ++S +Y
Sbjct: 255 ANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSY 314
Query: 350 RRPIQICKNGEILIEVIFQEEDDYGLVLYD--PKTESGRLIKMCGST 394
RP+ K+ + + E ++ LV +D K S IK C S+
Sbjct: 315 MRPLVYSKDK----KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSS 357
>AT4G12560.1 | F-box and associated interaction domains-containing
protein | Chr4:7441815-7443157 FORWARD LENGTH=413 |
201606
Length = 413
Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 131/287 (45%), Gaps = 36/287 (12%)
Query: 137 EIDYPFKYSRSNVELLGSCNGLVCIKWYKGEYLCVWNPFTNEYKEIPKQLPTQFPRDSRI 196
++++P K E+ GS NGL+ + + L V+NP T + +P P S
Sbjct: 78 DVEHPMKRG-GPTEVFGSSNGLIGLSNSPTD-LAVFNPSTRQIHRLPPS-SIDLPDGSST 134
Query: 197 HGINAYGFGCDCNNKNYKIVRI----ITSESE---EYDSEVHVYTFESDCWTIIQPTPFG 249
G YG G D + +YK+VR+ I SE E + EV V++ + + W I+
Sbjct: 135 RGYVFYGLGYDSVSDDYKVVRMVQFKIDSEDELGCSFPYEVKVFSLKKNSWKRIESVASS 194
Query: 250 TQ-----------ERLRGMLVKGVLHFLSKHT------NVIFSFDIISEIFYETPIPYLL 292
Q R G+L LH++ N+I FD+ E F P +
Sbjct: 195 IQLLFYFYYHLLYRRGYGVLAGNSLHWVLPRRPGLIAFNLIVRFDLALEEFEIVRFPEAV 254
Query: 293 ED---PFATEIGVLQGDLSLVGHCYQIRVDVWIMKDYGEKISWFKIFSINQPSVLRSLNY 349
+ +IGVL G L L+ + Q VDVW+MK+Y + SW K+F++ +P ++S +Y
Sbjct: 255 ANGNVDIQMDIGVLDGCLCLMCNYDQSYVDVWMMKEYNVRDSWTKVFTVQKPKSVKSFSY 314
Query: 350 RRPIQICKNGEILIEVIFQEEDDYGLVLYD--PKTESGRLIKMCGST 394
RP+ K+ + + E ++ LV +D K S IK C S+
Sbjct: 315 MRPLVYSKDK----KKVLLELNNTKLVWFDLESKKMSTLRIKDCPSS 357
>AT3G23880.1 | F-box and associated interaction domains-containing
protein | Chr3:8622061-8623155 REVERSE LENGTH=364 |
201606
Length = 364
Score = 84.7 bits (208), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 130/272 (47%), Gaps = 26/272 (9%)
Query: 146 RSNVELLGSCNGLVCIKWYKGEYLCVWNPFTNEYKEIPKQLPTQFPRDSRIHGINAYGFG 205
R +++G+C+GLVC + L +WNP ++ ++L + S + YGFG
Sbjct: 107 RDYYQVVGTCHGLVCFHVDYDKSLYLWNPTI----KLQQRLSSSDLETSDDECVVTYGFG 162
Query: 206 CDCNNKNYKIVRIITSESEEYDSEVHVYTFESDCWTIIQPTPFG---TQERLRGMLVKGV 262
D + +YK+V ++ + + E +Y+ W P G + G+ + G
Sbjct: 163 YDESEDDYKVVALL-QQRHQVKIETKIYSTRQKLWRSNTSFPSGVVVADKSRSGIYINGT 221
Query: 263 LHFLSKHTNVIFS---FDIISEIFYETPIPYLL-EDPFATEIGVLQGDLSLVGHCYQIRV 318
L++ + ++ ++ +D+ + F E P P F +G L+G LS+V +C
Sbjct: 222 LNWAATSSSSSWTIISYDMSRDEFKELPGPVCCGRGCFTMTLGDLRGCLSMVCYCKGANA 281
Query: 319 DVWIMKDYGEKISWFKIFSINQPSVLRSLNYRRPIQICKNGEILIEVIFQEEDDYGLVLY 378
DVW+MK++GE SW K+ SI P + ++ RP+ I +L+E F+ GL LY
Sbjct: 282 DVWVMKEFGEVYSWSKLLSI--PGL---TDFVRPLWISDGLVVLLE--FRS----GLALY 330
Query: 379 DPKTESGRL-IKMCGSTDGWNDVQDYVGTLVS 409
+ +GR + S G D + Y+ T+VS
Sbjct: 331 N--CSNGRFHYPVSNSISGCRDAKVYLKTMVS 360