BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000020.1_g0020.1
(333 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 244 4e-80
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 250 4e-75
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 250 4e-75
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 89 1e-21
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 244 bits (623), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 115/229 (50%), Positives = 159/229 (69%), Gaps = 2/229 (0%)
Query: 11 LVLLLYVDDIILTGSSTDLINSLIMSLHSEFAMKDLGTLHYFLGIEVTGSSSSELLLTQN 70
+ LLLYVDDI+LTGSS L+N LI L S F+MKDLG +HYFLGI++ + S L L+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLFLSQT 59
Query: 71 KYTLELLQKAELLESKPIATPIPFGKRLSQADGVLLDDPTHYRSLVGGLQYLTMTRPDIA 130
KY ++L A +L+ KP++TP+P K S DP+ +RS+VG LQYLT+TRPDI+
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPLPL-KLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDIS 118
Query: 131 FGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSGISVKSGDITSLTAYCDSDWAGCPDS 190
+ VN V Q + EP ++KR+ RY+KGT+ G+ + ++ A+CDSDWAGC +
Sbjct: 119 YAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTST 178
Query: 191 RRSTCGYCVFLGSTLVAWCSKKQPTVARSSTEAEYKALAVATSELLWLS 239
RRST G+C FLG +++W +K+QPTV+RSSTE EY+ALA+ +EL W S
Sbjct: 179 RRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 250 bits (638), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 11 LVLLLYVDDIILTGSSTDLINSLIMSLHSEFAMKDLGTLHYFLGIEVTGSSSSELLLTQN 70
L +L+YVDDII+ ++ ++ L L S F ++DLG L YFLG+E+ S++ + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG-INICQR 336
Query: 71 KYTLELLQKAELLESKPIATPIPFGKRLSQADGVLLDDPTHYRSLVGGLQYLTMTRPDIA 130
KY L+LL + LL KP + P+ S G D YR L+G L YL +TR DI+
Sbjct: 337 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 396
Query: 131 FGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSGISVKSGDITSLTAYCDSDWAGCPDS 190
F VN ++QF + PR H Q V +I YIKGT+G G+ S L + D+ + C D+
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDT 456
Query: 191 RRSTCGYCVFLGSTLVAWCSKKQPTVARSSTEAEYKALAVATSELLWLSYVLAELGISVS 250
RRST GYC+FLG++L++W SKKQ V++SS EAEY+AL+ AT E++WL+ EL + +S
Sbjct: 457 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 516
Query: 251 KPFVLKCDNLGARHLATNPVFHARTKHVEIDYHFVRDL-VSSGALRLDFVPSHHQLADVF 309
KP +L CDN A H+ATN VFH RTKH+E D H VR+ V L F Q D F
Sbjct: 517 KPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGF 574
Query: 310 TKGLS 314
T+ LS
Sbjct: 575 TEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 250 bits (638), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 135/305 (44%), Positives = 186/305 (60%), Gaps = 4/305 (1%)
Query: 11 LVLLLYVDDIILTGSSTDLINSLIMSLHSEFAMKDLGTLHYFLGIEVTGSSSSELLLTQN 70
L +L+YVDDII+ ++ ++ L L S F ++DLG L YFLG+E+ S++ + + Q
Sbjct: 278 LCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAG-INICQR 336
Query: 71 KYTLELLQKAELLESKPIATPIPFGKRLSQADGVLLDDPTHYRSLVGGLQYLTMTRPDIA 130
KY L+LL + LL KP + P+ S G D YR L+G L YL +TR DI+
Sbjct: 337 KYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDIS 396
Query: 131 FGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSGISVKSGDITSLTAYCDSDWAGCPDS 190
F VN ++QF + PR H Q V +I YIKGT+G G+ S L + D+ + C D+
Sbjct: 397 FAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDT 456
Query: 191 RRSTCGYCVFLGSTLVAWCSKKQPTVARSSTEAEYKALAVATSELLWLSYVLAELGISVS 250
RRST GYC+FLG++L++W SKKQ V++SS EAEY+AL+ AT E++WL+ EL + +S
Sbjct: 457 RRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLS 516
Query: 251 KPFVLKCDNLGARHLATNPVFHARTKHVEIDYHFVRDL-VSSGALRLDFVPSHHQLADVF 309
KP +L CDN A H+ATN VFH RTKH+E D H VR+ V L F Q D F
Sbjct: 517 KPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGF 574
Query: 310 TKGLS 314
T+ LS
Sbjct: 575 TEYLS 579
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 88.6 bits (218), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%)
Query: 121 YLTMTRPDIAFGVNYVAQFLKEPRDVHLQMVKRIFRYIKGTLGSGISVKSGDITSLTAYC 180
YLT+TRPD+ F VN ++QF R +Q V ++ Y+KGT+G G+ + L A+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 181 DSDWAGCPDSRRSTCGYC 198
DSDWA CPD+RRS G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79