BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000021.1_g0010.1
(204 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 1e-43
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 155 1e-43
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 121 7e-34
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 67 2e-14
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (393), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 117/199 (58%)
Query: 4 CNPVSTLVEVGLKLLQNSTSTEVDRTLYKQIVGCLMYMTATRPDIMYAVSLISRFMENPK 63
C P S ++ + +S VD Y++++G LMY+ TR DI +AV+ +S+F E P+
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 64 EMHLLAAKRILRYLKGSINLGILYRKGESLNLIGFTDSDYAGDSNDRKSTSGYVLMMGSG 123
H A +IL Y+KG++ G+ Y + L F+D+ + + R+ST+GY + +G+
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 124 AISWMSKKQQIVTLSTTEAEYVATVLCACQAIWLRKLLEELQCHSNGSTLIYCDNNSAIK 183
ISW SKKQQ+V+ S+ EAEY A + +WL + ELQ + TL++CDN +AI
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530
Query: 184 LSKNPVLHGRSKHIDVRYH 202
++ N V H R+KHI+ H
Sbjct: 531 IATNAVFHERTKHIESDCH 549
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 155 bits (393), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 117/199 (58%)
Query: 4 CNPVSTLVEVGLKLLQNSTSTEVDRTLYKQIVGCLMYMTATRPDIMYAVSLISRFMENPK 63
C P S ++ + +S VD Y++++G LMY+ TR DI +AV+ +S+F E P+
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 64 EMHLLAAKRILRYLKGSINLGILYRKGESLNLIGFTDSDYAGDSNDRKSTSGYVLMMGSG 123
H A +IL Y+KG++ G+ Y + L F+D+ + + R+ST+GY + +G+
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 124 AISWMSKKQQIVTLSTTEAEYVATVLCACQAIWLRKLLEELQCHSNGSTLIYCDNNSAIK 183
ISW SKKQQ+V+ S+ EAEY A + +WL + ELQ + TL++CDN +AI
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530
Query: 184 LSKNPVLHGRSKHIDVRYH 202
++ N V H R+KHI+ H
Sbjct: 531 IATNAVFHERTKHIESDCH 549
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 121 bits (303), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 1 MDNCNPVSTLVEVGLKLLQN-STSTEVDRTLYKQIVGCLMYMTATRPDIMYAVSLISRFM 59
M +C P+ST + LKL + ST+ D + ++ IVG L Y+T TRPDI YAV+++ + M
Sbjct: 71 MLDCKPMST--PLPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRM 128
Query: 60 ENPKEMHLLAAKRILRYLKGSINLGILYRKGESLNLIGFTDSDYAGDSNDRKSTSGYVLM 119
P KR+LRY+KG+I G+ K LN+ F DSD+AG ++ R+ST+G+
Sbjct: 129 HEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTF 188
Query: 120 MGSGAISWMSKKQQIVTLSTTEAEYVATVLCACQAIW 156
+G ISW +K+Q V+ S+TE EY A L A + W
Sbjct: 189 LGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 67.0 bits (162), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 47/78 (60%)
Query: 39 MYMTATRPDIMYAVSLISRFMENPKEMHLLAAKRILRYLKGSINLGILYRKGESLNLIGF 98
MY+T TRPD+ +AV+ +S+F + + A ++L Y+KG++ G+ Y L L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 99 TDSDYAGDSNDRKSTSGY 116
DSD+A + R+S +G+
Sbjct: 61 ADSDWASCPDTRRSVTGF 78