BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0010.1
(59 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50700.1 | hydroxysteroid dehydrogenase 1 | Chr5:20623259-206... 64 1e-13
AT5G50600.1 | hydroxysteroid dehydrogenase 1 | Chr5:20589917-205... 64 1e-13
>AT5G50700.1 | hydroxysteroid dehydrogenase 1 |
Chr5:20623259-20624995 REVERSE LENGTH=349 | 201606
Length = 349
Score = 63.5 bits (153), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 1 YLWRVFCPELLDLLSSMFLLTGPGISQREALNKKVLDVTGAKNFLYPDTIQSPSDIKAE 59
YLW+V CPEL++ + +TG G+S+ ALNK+++D+ G ++ LYP++I++P +IK++
Sbjct: 292 YLWKVLCPELIEWGCRLLYMTGTGMSEDTALNKRIMDIPGVRSTLYPESIRTP-EIKSD 349
>AT5G50600.1 | hydroxysteroid dehydrogenase 1 |
Chr5:20589917-20591653 REVERSE LENGTH=349 | 201606
Length = 349
Score = 63.5 bits (153), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 45/59 (76%), Gaps = 1/59 (1%)
Query: 1 YLWRVFCPELLDLLSSMFLLTGPGISQREALNKKVLDVTGAKNFLYPDTIQSPSDIKAE 59
YLW+V CPEL++ + +TG G+S+ ALNK+++D+ G ++ LYP++I++P +IK++
Sbjct: 292 YLWKVLCPELIEWGCRLLYMTGTGMSEDTALNKRIMDIPGVRSTLYPESIRTP-EIKSD 349