BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0020.1
(122 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G44110.2 | DNAJ homologue 3 | Chr3:15869179-15871059 REVERSE ... 59 3e-11
AT3G44110.1 | DNAJ homologue 3 | Chr3:15869115-15871059 REVERSE ... 59 3e-11
AT5G22060.1 | DNAJ homologue 2 | Chr5:7303798-7305668 REVERSE LE... 58 1e-10
>AT3G44110.2 | DNAJ homologue 3 | Chr3:15869179-15871059 REVERSE
LENGTH=343 | 201606
Length = 343
Score = 59.3 bits (142), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 74 FPKFKRQGEDIFVDHTLARNEAFYGFQFVLSQLSSWHLLIKTS 116
PKFKR+GED+FV+HTL+ EA GFQFVL+ L LLIK++
Sbjct: 262 HPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSN 304
>AT3G44110.1 | DNAJ homologue 3 | Chr3:15869115-15871059 REVERSE
LENGTH=420 | 201606
Length = 420
Score = 59.3 bits (142), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 33/43 (76%)
Query: 74 FPKFKRQGEDIFVDHTLARNEAFYGFQFVLSQLSSWHLLIKTS 116
PKFKR+GED+FV+HTL+ EA GFQFVL+ L LLIK++
Sbjct: 262 HPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSN 304
>AT5G22060.1 | DNAJ homologue 2 | Chr5:7303798-7305668 REVERSE
LENGTH=419 | 201606
Length = 419
Score = 57.8 bits (138), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%)
Query: 75 PKFKRQGEDIFVDHTLARNEAFYGFQFVLSQLSSWHLLIKT 115
PKFKR+GED+FV+HT++ EA GFQFVL+ L LLIK+
Sbjct: 264 PKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKS 304