BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0040.1
(318 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G27010.2 | TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-doma... 249 2e-81
AT3G27010.1 | TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-doma... 249 2e-81
AT1G69690.1 | TCP family transcription factor | Chr1:26216449-26... 137 1e-37
AT3G47620.1 | TEOSINTE BRANCHED%2C cycloidea and PCF (TCP) 14 | ... 137 9e-37
AT2G45680.1 | TCP family transcription factor | Chr2:18820717-18... 133 5e-36
>AT3G27010.2 | TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain
family protein 20 | Chr3:9957810-9958754 REVERSE
LENGTH=314 | 201606
Length = 314
Score = 249 bits (637), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 198/301 (65%), Gaps = 29/301 (9%)
Query: 27 DMGSSTGGGEN-KSAAEIKDFQIGVVGGDKDENNNNNNKKQLLAPKRSSNKDRHTKVDGR 85
D S+ EN K EIKDFQI V DK+ N + N+ QL PKRSSNKDRHTKV+GR
Sbjct: 30 DAASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQL-GPKRSSNKDRHTKVEGR 88
Query: 86 GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAA 145
GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG+GTIPASALA++AA
Sbjct: 89 GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAA 148
Query: 146 AAT---AASQSGSAGLHHEL----GTTGRTTTNWTMLPSVGGGSIGGGRSH---GLWPPV 195
+ S + + H+L ++GR NW +GGG G RS GLWP V
Sbjct: 149 TSNHHQGGSLTAGLMISHDLDGGSSSSGR-PLNW----GIGGGE-GVSRSSLPTGLWPNV 202
Query: 196 TGFGPGLVPPPTGPSTSNLGNDGSNFMPRIGFHGFEMPGSNLGHMSFSSILGGNSQTLPG 255
GFG G+ P TG L ++G+ + RIGF GF+ PG +GHMSF+SILGGN +PG
Sbjct: 203 AGFGSGV--PTTG-----LMSEGAGY--RIGFPGFDFPG--VGHMSFASILGGNHNQMPG 251
Query: 256 LELGLSQDGHIGVLNPQALNQFYHQMAQQTRTTSGSMHQQQQQEEHHHHQQPPSKDDSQG 315
LELGLSQ+G++GVLNPQ+ Q Y QM Q G + H Q+ KDDSQG
Sbjct: 252 LELGLSQEGNVGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQG 311
Query: 316 S 316
S
Sbjct: 312 S 312
>AT3G27010.1 | TEOSINTE BRANCHED 1%2C cycloidea%2C PCF (TCP)-domain
family protein 20 | Chr3:9957810-9958754 REVERSE
LENGTH=314 | 201606
Length = 314
Score = 249 bits (637), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 168/301 (55%), Positives = 198/301 (65%), Gaps = 29/301 (9%)
Query: 27 DMGSSTGGGEN-KSAAEIKDFQIGVVGGDKDENNNNNNKKQLLAPKRSSNKDRHTKVDGR 85
D S+ EN K EIKDFQI V DK+ N + N+ QL PKRSSNKDRHTKV+GR
Sbjct: 30 DAASAVVSDENRKPTTEIKDFQIVVSASDKEPNKKSQNQNQL-GPKRSSNKDRHTKVEGR 88
Query: 86 GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAAA 145
GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATG+GTIPASALA++AA
Sbjct: 89 GRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGSGTIPASALASSAA 148
Query: 146 AAT---AASQSGSAGLHHEL----GTTGRTTTNWTMLPSVGGGSIGGGRSH---GLWPPV 195
+ S + + H+L ++GR NW +GGG G RS GLWP V
Sbjct: 149 TSNHHQGGSLTAGLMISHDLDGGSSSSGR-PLNW----GIGGGE-GVSRSSLPTGLWPNV 202
Query: 196 TGFGPGLVPPPTGPSTSNLGNDGSNFMPRIGFHGFEMPGSNLGHMSFSSILGGNSQTLPG 255
GFG G+ P TG L ++G+ + RIGF GF+ PG +GHMSF+SILGGN +PG
Sbjct: 203 AGFGSGV--PTTG-----LMSEGAGY--RIGFPGFDFPG--VGHMSFASILGGNHNQMPG 251
Query: 256 LELGLSQDGHIGVLNPQALNQFYHQMAQQTRTTSGSMHQQQQQEEHHHHQQPPSKDDSQG 315
LELGLSQ+G++GVLNPQ+ Q Y QM Q G + H Q+ KDDSQG
Sbjct: 252 LELGLSQEGNVGVLNPQSFTQIYQQMGQAQAQAQGRVLHHMHHNHEEHQQESGEKDDSQG 311
Query: 316 S 316
S
Sbjct: 312 S 312
>AT1G69690.1 | TCP family transcription factor |
Chr1:26216449-26217426 FORWARD LENGTH=325 | 201606
Length = 325
Score = 137 bits (344), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 60/69 (86%), Positives = 68/69 (98%)
Query: 70 PKRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAA 129
PKR+S KDRHTKV+GRGRRIRMPA+CAAR+FQLTRELGHKSDGETI+WLLQQAEP++IAA
Sbjct: 47 PKRTSTKDRHTKVEGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAA 106
Query: 130 TGTGTIPAS 138
TGTGTIPA+
Sbjct: 107 TGTGTIPAN 115
>AT3G47620.1 | TEOSINTE BRANCHED%2C cycloidea and PCF (TCP) 14 |
Chr3:17559004-17560473 FORWARD LENGTH=489 | 201606
Length = 489
Score = 137 bits (346), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 62/68 (91%), Positives = 67/68 (98%)
Query: 71 KRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 130
KR+S KDRHTKVDGRGRRIRMPALCAAR+FQLTRELGHKSDGETI+WLLQQAEPS+IAAT
Sbjct: 113 KRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAAT 172
Query: 131 GTGTIPAS 138
GTGTIPA+
Sbjct: 173 GTGTIPAN 180
>AT2G45680.1 | TCP family transcription factor |
Chr2:18820717-18821787 REVERSE LENGTH=356 | 201606
Length = 356
Score = 133 bits (335), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 59/72 (81%), Positives = 67/72 (93%)
Query: 71 KRSSNKDRHTKVDGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAAT 130
KR+S KDRHTKV+GRGRRIRMPA CAARIFQLTRELGHKSDGETI+WLL+ AEP+IIAAT
Sbjct: 71 KRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLENAEPAIIAAT 130
Query: 131 GTGTIPASALAA 142
GTGT+PA A++
Sbjct: 131 GTGTVPAIAMSV 142