BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0120.1
(171 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G50760.1 | SAUR-like auxin-responsive protein family | Chr5:2... 89 2e-22
AT3G61900.1 | SAUR-like auxin-responsive protein family | Chr3:2... 76 5e-18
AT4G34750.2 | SAUR-like auxin-responsive protein family | Chr4:1... 72 4e-16
AT4G34750.1 | SAUR-like auxin-responsive protein family | Chr4:1... 72 4e-16
AT2G46690.1 | SAUR-like auxin-responsive protein family | Chr2:1... 70 1e-15
>AT5G50760.1 | SAUR-like auxin-responsive protein family |
Chr5:20644780-20645331 FORWARD LENGTH=183 | 201606
Length = 183
Score = 89.4 bits (220), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 77/130 (59%), Gaps = 14/130 (10%)
Query: 8 KGLIIKTWERCRSLGRSKKGSPFGNSIQTKSKPWSG-IPLRKSKSWSVTPFDHLSSSKSS 66
K I+KTW + +S G + + TKSK G L +KS + SK
Sbjct: 2 KNPILKTWRKVKSFGHTSSST---TPSFTKSKSCHGSFRLEDAKS---------NESKGK 49
Query: 67 KNRVAPG-GCFTVYVGEERQRFVIKTGYANHPLFKNLLEEAEMEYGFNSEGPLVLPCKVG 125
+ +P G FTVYVG +QR V+KT NHPLFKNLLE+AE EYG+ +GP+VLPC+V
Sbjct: 50 PKKESPSHGFFTVYVGPTKQRIVVKTKLLNHPLFKNLLEDAETEYGYRRDGPIVLPCEVD 109
Query: 126 YFYRVLSEME 135
+F++ L++M+
Sbjct: 110 FFFKALADMK 119
>AT3G61900.1 | SAUR-like auxin-responsive protein family |
Chr3:22925813-22926379 FORWARD LENGTH=136 | 201606
Length = 136
Score = 76.3 bits (186), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 71 APGGCFTVYVG---EERQRFVIKTGYANHPLFKNLLEEAEMEYGFNSEGPLVLPCKVGYF 127
P GC + VG EE+QRFV+ Y NHPLF LL EAE EYGF +G + +PC V F
Sbjct: 30 VPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF 89
Query: 128 YRVLSEM---EMDGKNEDDDIYQTGC 150
R + +M E ++DD QTGC
Sbjct: 90 -RYVQDMINRERSLDDDDDASKQTGC 114
>AT4G34750.2 | SAUR-like auxin-responsive protein family |
Chr4:16577566-16578018 FORWARD LENGTH=150 | 201606
Length = 150
Score = 71.6 bits (174), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 59 HLSSSKSSKNRVAPGGCFTVYVGEERQRFVIKTGYANHPLFKNLLEEAEMEYGFNSEGPL 118
H+ SS + P G V VGE R+R+V++ + NHP+F+ LL EAE EYGF + GPL
Sbjct: 25 HIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYGFANVGPL 84
Query: 119 VLPCKVGYFYRVLS 132
+PC F +++
Sbjct: 85 AIPCDESLFEDIIA 98
>AT4G34750.1 | SAUR-like auxin-responsive protein family |
Chr4:16577566-16578018 FORWARD LENGTH=150 | 201606
Length = 150
Score = 71.6 bits (174), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 59 HLSSSKSSKNRVAPGGCFTVYVGEERQRFVIKTGYANHPLFKNLLEEAEMEYGFNSEGPL 118
H+ SS + P G V VGE R+R+V++ + NHP+F+ LL EAE EYGF + GPL
Sbjct: 25 HIGSSNNDPVSDVPPGHVAVSVGENRRRYVVRAKHLNHPIFRRLLAEAEEEYGFANVGPL 84
Query: 119 VLPCKVGYFYRVLS 132
+PC F +++
Sbjct: 85 AIPCDESLFEDIIA 98
>AT2G46690.1 | SAUR-like auxin-responsive protein family |
Chr2:19180904-19181269 FORWARD LENGTH=121 | 201606
Length = 121
Score = 69.7 bits (169), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Query: 60 LSSSKSSKNRVAPGGCFTVYVG---EERQRFVIKTGYANHPLFKNLLEEAEMEYGFNSEG 116
L +S K + P GC + VG EE+QRF++ Y NHPLF LL+EAE EYGF+ +G
Sbjct: 13 LHRKQSVKVKDVPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKG 72
Query: 117 PLVLPCKVGYFYRVLSEME 135
+ +PC V F V + ++
Sbjct: 73 TITIPCHVEEFRYVQALID 91