BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0160.1
(246 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G36228.1 | nucleic acid binding / zinc ion binding protein | ... 67 1e-12
AT2G01050.1 | zinc ion binding / nucleic acid binding protein | ... 61 2e-10
AT3G31430.1 | zinc knuckle (CCHC-type) family protein | Chr3:127... 60 2e-10
AT5G18636.1 | Ta11-like non-LTR retrotransposon | Chr5:6211268-6... 50 4e-07
AT5G25200.1 | Ta11-like non-LTR retrotransposon | Chr5:8716766-8... 50 5e-07
>AT5G36228.1 | nucleic acid binding / zinc ion binding protein |
Chr5:14271691-14272776 FORWARD LENGTH=361 | 201606
Length = 361
Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 3/157 (1%)
Query: 75 VKDNVFLIKFNTATELEIALESSPWVIQEELIVLQQCRQDVMPGDHIFESAWFWVQMHGL 134
+ D F ++F + +L L +PWV E I LQ R + P + WV + G+
Sbjct: 73 LDDRCFQVRFRSEIDLLNGLRRAPWVFNEWFIALQ--RWEDFPTEDFLTFIDVWVHIRGI 130
Query: 135 PPSHLNSTIVNRLAETLGTIVPTT-NDDAIKWSLFGRVRIELNLKKPFVPRIYLKLSNTK 193
P +++ V +A TLG +V N++ F RV++ ++ +P ++ ++ +
Sbjct: 131 PLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRE 190
Query: 194 IIAVHLKIEKLPRFCIACGFTGHTIKFCPTMLACNDL 230
+ + EKL R C C H + CP ++ ++
Sbjct: 191 RAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVVHQEEM 227
>AT2G01050.1 | zinc ion binding / nucleic acid binding protein |
Chr2:68337-69884 REVERSE LENGTH=515 | 201606
Length = 515
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 15/224 (6%)
Query: 6 NQFIQQFAALT---TDDPPPIVIEGDDVTQSSQDIVKNGVIWFQSDKQIDINQAMSRLSR 62
++F+++ L +D P++ G++V ++ + K +I QI I+ +L
Sbjct: 42 DEFVRERVGLEFPDGEDEEPVITIGEEVLEAMNGLWKKCMIVKVLGSQIPISVLNRKLRE 101
Query: 63 VIHGPNRFNISEVKDNVFLIKFNTATELEIALESSPWVIQEELIVLQQCRQDVMPGDHIF 122
+ + ++ F+I+F E AL PW + +++Q P
Sbjct: 102 LWKPSGVMTVMDLPRQFFMIRFELEEEYMAALTGGPWRVLGNYLLVQDWSSRFDPLRDDI 161
Query: 123 ESAWFWVQMHGLPPSHLNSTIVNRLAETLGTIVP----TTNDDAIKWSLFGRVRIELNLK 178
+ WV++ +P ++ + ++ +A LG + T N D + F RV IE+NL
Sbjct: 162 VTTPVWVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGR---FARVCIEVNLA 218
Query: 179 KPFVPRIYLKLSNTKIIAVHLKIEKLPRFCIACGFTGHTIKFCP 222
KP + + + +A E L + C +CG GH + CP
Sbjct: 219 KPLKGTVLIN-GDRYFVA----YEGLSKICSSCGIYGHLVHSCP 257
>AT3G31430.1 | zinc knuckle (CCHC-type) family protein |
Chr3:12795861-12796871 REVERSE LENGTH=336 | 201606
Length = 336
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 75/180 (41%), Gaps = 20/180 (11%)
Query: 61 SRVIHGPNRFNISEVKDNVFLIKFNTATELEIALESSPWVIQEELIVLQQCRQDVMPGDH 120
S ++HG I E + F+ F LE L PW + +I+LQ+ P
Sbjct: 160 SGLVHG----RIMEGRQFHFI--FTLEESLETVLRRGPWAFNDWMILLQRWE----PQIP 209
Query: 121 IFESAWFWVQMHGLPPSHLNSTIVNRLAETLGTIVPTT-NDDAIKWSLFGRVRIELNLKK 179
+F FWVQ+ G+P LN +V + LG ++ T N + + F RV + ++
Sbjct: 210 LFPFIPFWVQIRGIPFQFLNRGVVEHIGRALGQVLDTDFNVEVVARMDFARVLLHWDITH 269
Query: 180 PFVPRIYLKLSNTKIIAVHLKIEKLPRFCIACGFTGHTIKFCPTMLACNDLLKQNLTDEQ 239
P + + + + + + E+L FC CG H C L QN +EQ
Sbjct: 270 PLRFQRHFQFTAGVNTLLRFRYERLRGFCEVCGMLTHDFGAC---------LIQNGGEEQ 320
>AT5G18636.1 | Ta11-like non-LTR retrotransposon |
Chr5:6211268-6212371 FORWARD LENGTH=367 | 201606
Length = 367
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 82 IKFNTATELEIAL--ESSPWVIQEELIVLQQCRQDVMPGDHIFESAWFWVQMHGLPPSHL 139
++F A E+++ + PW+ + R V P ++ + WVQ+ G+P ++
Sbjct: 78 VQFVFANEIDLMMVQRREPWLFNNWFVAA--TRWQVAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 140 NSTIVNRLAETLGTIVPTTNDDAIKWSL-FGRVRIELNL--KKPFVPRIYLKLSNTKIIA 196
+ V +A+ LG I+ +A + F RVR+ + + F RI T I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATI- 194
Query: 197 VHLKIEKLPRFCIACGFTGHTIKFCP 222
+ E+L R C +C H +CP
Sbjct: 195 -RFQYERLRRLCSSCFRFTHNRAYCP 219
>AT5G25200.1 | Ta11-like non-LTR retrotransposon |
Chr5:8716766-8717869 REVERSE LENGTH=367 | 201606
Length = 367
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 9/146 (6%)
Query: 82 IKFNTATELEIAL--ESSPWVIQEELIVLQQCRQDVMPGDHIFESAWFWVQMHGLPPSHL 139
++F A E+++ + PW+ + R V P ++ + WVQ+ G+P ++
Sbjct: 78 VQFLFANEIDLMMVQRREPWLFNNWFVA--ATRWQVAPAHNLVTTIDLWVQIRGIPLPYV 135
Query: 140 NSTIVNRLAETLGTIVPTTNDDAIKWSL-FGRVRIELNL--KKPFVPRIYLKLSNTKIIA 196
+ V +A+ LG I+ +A + F RVR+ + + F RI T I
Sbjct: 136 SEETVLEIAQDLGEIISLDFHEATSPQIAFIRVRVRFGITDRLRFFQRIIFDSGETATI- 194
Query: 197 VHLKIEKLPRFCIACGFTGHTIKFCP 222
+ E+L R C +C H +CP
Sbjct: 195 -RFQYERLRRLCSSCFRFTHNRAYCP 219