BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0170.1
(1316 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G24972.1 | tapetum determinant 1 | Chr4:12838220-12839619 FOR... 166 6e-47
AT1G32583.2 | tapetum determinant protein | Chr1:11787351-117881... 157 8e-44
AT1G32583.1 | tapetum determinant protein | Chr1:11787351-117881... 157 8e-44
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 148 2e-36
AT3G24255.5 | RNA-directed DNA polymerase (reverse transcriptase... 127 6e-30
>AT4G24972.1 | tapetum determinant 1 | Chr4:12838220-12839619 FORWARD
LENGTH=176 | 201606
Length = 176
Score = 166 bits (421), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 90/181 (49%), Positives = 114/181 (62%), Gaps = 21/181 (11%)
Query: 1151 MSRRRIII--LVAAIFLVGL-LLSFFTDYQHHLR------------PSPPAKHSFLFSPG 1195
M+RRR+++ + + L G+ L+S LR PS + L SPG
Sbjct: 1 MNRRRLLVSATLLSYLLYGMALVSVEASGGEKLRDNLDLTKTTTSSPSISHRKMLLLSPG 60
Query: 1196 GRKLLGKHYPAKLEPNRVWGDKCSKADIVVNQGPTAPLPNGIPTYTVEIMNVCVSGCVIS 1255
K +EP R+ G+KC DIVVNQ T P+PNGIP Y VEI N C+SGC+IS
Sbjct: 61 TGKT-----ERSVEPERI-GEKCKSTDIVVNQAVTEPMPNGIPGYMVEITNQCMSGCIIS 114
Query: 1256 RIHFSCGWFSSARLINPKVFKRLRYNDCLVNGGKPLANGATLSFQYANTFRYPLSVSSIS 1315
RIH +CGWFSSA+LINP+VFKR+ Y+DCLVN GKPL G+TLSF YANTF Y LSV+ ++
Sbjct: 115 RIHINCGWFSSAKLINPRVFKRIHYDDCLVNNGKPLPFGSTLSFHYANTFPYHLSVAFVT 174
Query: 1316 C 1316
C
Sbjct: 175 C 175
>AT1G32583.2 | tapetum determinant protein | Chr1:11787351-11788103
FORWARD LENGTH=179 | 201606
Length = 179
Score = 157 bits (398), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Query: 1211 NRVWGDKCSKADIVVNQGPTAPLPNGIPTYTVEIMNVCVSGCVISRIHFSCGWFSSARLI 1270
NR+ G CSK DIV+ QG T PLP+G+P+YTVEI N CVS C I+ IH SCGWFSS RL+
Sbjct: 74 NRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLV 132
Query: 1271 NPKVFKRLRYNDCLVNGGKPLANGATLSFQYANTFRYPLSVSSISC 1316
NP+VF+RL Y+DCLVN G+PL G +LSFQYAN+F YPLSV+S+SC
Sbjct: 133 NPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
>AT1G32583.1 | tapetum determinant protein | Chr1:11787351-11788103
FORWARD LENGTH=179 | 201606
Length = 179
Score = 157 bits (398), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 71/106 (66%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Query: 1211 NRVWGDKCSKADIVVNQGPTAPLPNGIPTYTVEIMNVCVSGCVISRIHFSCGWFSSARLI 1270
NR+ G CSK DIV+ QG T PLP+G+P+YTVEI N CVS C I+ IH SCGWFSS RL+
Sbjct: 74 NRI-GQDCSKDDIVLFQGSTNPLPSGVPSYTVEIFNSCVSDCNIAEIHVSCGWFSSVRLV 132
Query: 1271 NPKVFKRLRYNDCLVNGGKPLANGATLSFQYANTFRYPLSVSSISC 1316
NP+VF+RL Y+DCLVN G+PL G +LSFQYAN+F YPLSV+S+SC
Sbjct: 133 NPRVFRRLDYDDCLVNDGQPLGPGQSLSFQYANSFSYPLSVASVSC 178
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/403 (26%), Positives = 192/403 (47%), Gaps = 25/403 (6%)
Query: 135 IGDMNALLEQNEKWGG-QSNIPF--MSSFKQFVRDANLVDLGFNGPAFTWTNNKAIHHLT 191
+GD + + ++ + Q++IP + F+ +RD++LVD+ G +TW+N++ + +
Sbjct: 224 VGDFDQIAATSDHYSVLQTSIPMRGLEEFQNCLRDSDLVDIPSRGVHYTWSNHQDDNPII 283
Query: 192 KERLDRGLCDATWLMQFPQA-GVFHLPRYNSDHAPILLKLKVEGQSLKTITKFEIFWTKH 250
+ +LDR + + W FP A VF L SDH+P ++ L+ + K ++ F + H
Sbjct: 284 R-KLDRAIANGDWFSSFPSAIAVFELSGV-SDHSPCIIILENLPKRSKKCFRYFSFLSTH 341
Query: 251 EDYNRIFKEKWVQS--EGSFL----ERLHQVKDSIKGWSRRAFGIIKNRLNILRKRLGDL 304
+ W + GS + E L K K +R+ FG I+++ ++ L L
Sbjct: 342 PTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGFGNIQHKT---KEALDSL 398
Query: 305 QKLPS------TTTLLVMESKIQEELLFLENIERTKAEQRSRVKWVFNGDRNTKAFHIAM 358
+ + S + +L +E +++ F + Q+SR+KW+ +GD NT+ FH +
Sbjct: 399 ESIQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVI 458
Query: 359 STRRQKNKIHQITLSNGQTTSDINSISQEFIEHFQNLFKADP---VSDPPTEIINAYKVF 415
+ KN I + + + ++ + + + ++ +L +D D I + +
Sbjct: 459 LANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDSDILTPDSVQRIKDIHPFR 518
Query: 416 SIEQLAD-ISRIPSAEEIKDVVMKMGSIKSPGPDGLPCFFFQHNWDTVGQDLISYIQSAF 474
+ LA +S +PS +EI V M K+PGPD FF +W V I+ ++ F
Sbjct: 519 CNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFF 578
Query: 475 STGLIEPHLNYTTIALIPKIRNPSTASQFRPIALCNSVYKFIT 517
TG + N T I LIPK+ S FRP++ C VYK IT
Sbjct: 579 RTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKIIT 621
>AT3G24255.5 | RNA-directed DNA polymerase (reverse
transcriptase)-related family protein |
Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
Length = 532
Score = 127 bits (318), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 3/266 (1%)
Query: 674 ITHLLFADDLIVFGKATQENLNTVMQIMEEYGRFSGQQVNYSKSSLYFSKGVPSNTKMQF 733
ITHL FADDL+VF + ++ ++QI ++ FSG Q++ KS++Y + GV N K
Sbjct: 8 ITHLCFADDLLVFTDGKKSSIEGILQIFGKFADFSGLQISLEKSTIYMA-GVKDNDKADI 66
Query: 734 VQTLNAPLMTDRDKYLGALVLKKDHRIESYNWLIEKFNKSLAGWKHKFTTQAGRSILIKS 793
+ + +YLG +L K Y L+EK + W + + AGR LI S
Sbjct: 67 LHSFPFASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISS 126
Query: 794 ILSSFCTYACSYQVMPKAVANSLEKIERSFWWGHSPSERKIHFINWDIITAPKHKGGLGI 853
++ S + S +P A ++ I SF W K + W + PK +GGLGI
Sbjct: 127 VIHSLTNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGI 186
Query: 854 RSIVEINSSLIAKMTWNFISKKNEIWVRLLQAKYVKDGDFWSHSISSG-SSHLWKALNNT 912
RS+ E N + K+ W +S +WV+ L+ ++ G FWS S ++ S +WK +
Sbjct: 187 RSLKEANKVSLLKLIWRMLS-STSLWVQWLRLYLLRKGSFWSISGNTTLGSWMWKKILKH 245
Query: 913 KDIIRNNCIWHIHNGVSIKIRSDPWN 938
+ + IHNG + D W+
Sbjct: 246 RALASGFVKHDIHNGSNTSFWFDNWS 271