BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0360.1
(1210 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 577 0.0
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 577 0.0
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 222 1e-65
AT1G21280.1 | Copia-like polyprotein/retrotransposon | Chr1:7447... 120 4e-30
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 108 1e-26
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 577 bits (1488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/589 (50%), Positives = 393/589 (66%), Gaps = 17/589 (2%)
Query: 630 SAELPLDPPKDSTGTTAIARPQRTRKQPDRLRDYVCSNSPSV-VYPLEHTFSINSFSAPH 688
SA + D P+ S T+ +RTRK P L+DY C + S+ ++ + S S +
Sbjct: 19 SANIQNDVPEPSVHTSH----RRTRK-PAYLQDYYCHSVASLTIHDISQFLSYEKVSPLY 73
Query: 689 KALLTSILSSREPSNFSEAMTSPHWREAMSNEIKALETNKTWSIVPLPPGKRPSGCKWVY 748
+ L I ++EPS ++EA W AM +EI A+ET TW I LPP K+P GCKWVY
Sbjct: 74 HSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVY 133
Query: 749 KIKFKSDGSIERYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVKVLLSIATIKGWSLHQL 808
KIK+ SDG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +VK++L+I+ I ++LHQL
Sbjct: 134 KIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193
Query: 809 DVNNAFLQGDLHEEVFMKLPPGFS-RQGES----SVCRLHKSLYGLKQASRQWFSKFSSV 863
D++NAFL GDL EE++MKLPPG++ RQG+S +VC L KS+YGLKQASRQWF KFS
Sbjct: 194 DISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVT 253
Query: 864 LLHKGFKQSKSDYSLFTFISSTTSIFVLVYVDDIIITGNNDSAISKLKSYLDHTFSLKDL 923
L+ GF QS SD++ F I++T + VLVYVDDIII NND+A+ +LKS L F L+DL
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 924 GPLKYFLGIEVSRSSHGLFLCQRKYALDILKDSGLTASKPSPFPMEQKLRLTPTDGDPLP 983
GPLKYFLG+E++RS+ G+ +CQRKYALD+L ++GL KPS PM+ + + G
Sbjct: 314 GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373
Query: 984 DPSVYRRLIGRLLYLTVTRPDITFADNNLSQFMQRPMTTHLDAAHRILRYIKGSLGNGIF 1043
D YRRLIGRL+YL +TR DI+FA N LSQF + P H A +IL YIKG++G G+F
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
Query: 1044 LSSSSSLHLTGYCDSDWASCPSTRRSTTGYFTMLGSSPLSWKSKKQLTVSRSSAEAEYRA 1103
SS + + L + D+ + SC TRRST GY LG+S +SWKSKKQ VS+SSAEAEYRA
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
Query: 1104 LAVLSCELQWLKYLLLDFGIDHSLPITVHCDNKAALHIADNPVFHERTKHIEIDCHLVRE 1163
L+ + E+ WL + + S P + CDN AA+HIA N VFHERTKHIE DCH VRE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Query: 1164 K-IKDNTIAPRFTPSEDQLADIFTK---PLGADSFKKIVGKLGVTSLHA 1208
+ + T++ F ++Q D FT+ P+ + IV G+ L A
Sbjct: 554 RSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 577 bits (1488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 297/589 (50%), Positives = 393/589 (66%), Gaps = 17/589 (2%)
Query: 630 SAELPLDPPKDSTGTTAIARPQRTRKQPDRLRDYVCSNSPSV-VYPLEHTFSINSFSAPH 688
SA + D P+ S T+ +RTRK P L+DY C + S+ ++ + S S +
Sbjct: 19 SANIQNDVPEPSVHTSH----RRTRK-PAYLQDYYCHSVASLTIHDISQFLSYEKVSPLY 73
Query: 689 KALLTSILSSREPSNFSEAMTSPHWREAMSNEIKALETNKTWSIVPLPPGKRPSGCKWVY 748
+ L I ++EPS ++EA W AM +EI A+ET TW I LPP K+P GCKWVY
Sbjct: 74 HSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVY 133
Query: 749 KIKFKSDGSIERYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVKVLLSIATIKGWSLHQL 808
KIK+ SDG+IERYKARLVAKGYTQ EG+D+ +TF+PV KL +VK++L+I+ I ++LHQL
Sbjct: 134 KIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQL 193
Query: 809 DVNNAFLQGDLHEEVFMKLPPGFS-RQGES----SVCRLHKSLYGLKQASRQWFSKFSSV 863
D++NAFL GDL EE++MKLPPG++ RQG+S +VC L KS+YGLKQASRQWF KFS
Sbjct: 194 DISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVT 253
Query: 864 LLHKGFKQSKSDYSLFTFISSTTSIFVLVYVDDIIITGNNDSAISKLKSYLDHTFSLKDL 923
L+ GF QS SD++ F I++T + VLVYVDDIII NND+A+ +LKS L F L+DL
Sbjct: 254 LIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDL 313
Query: 924 GPLKYFLGIEVSRSSHGLFLCQRKYALDILKDSGLTASKPSPFPMEQKLRLTPTDGDPLP 983
GPLKYFLG+E++RS+ G+ +CQRKYALD+L ++GL KPS PM+ + + G
Sbjct: 314 GPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFV 373
Query: 984 DPSVYRRLIGRLLYLTVTRPDITFADNNLSQFMQRPMTTHLDAAHRILRYIKGSLGNGIF 1043
D YRRLIGRL+YL +TR DI+FA N LSQF + P H A +IL YIKG++G G+F
Sbjct: 374 DAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLF 433
Query: 1044 LSSSSSLHLTGYCDSDWASCPSTRRSTTGYFTMLGSSPLSWKSKKQLTVSRSSAEAEYRA 1103
SS + + L + D+ + SC TRRST GY LG+S +SWKSKKQ VS+SSAEAEYRA
Sbjct: 434 YSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRA 493
Query: 1104 LAVLSCELQWLKYLLLDFGIDHSLPITVHCDNKAALHIADNPVFHERTKHIEIDCHLVRE 1163
L+ + E+ WL + + S P + CDN AA+HIA N VFHERTKHIE DCH VRE
Sbjct: 494 LSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
Query: 1164 K-IKDNTIAPRFTPSEDQLADIFTK---PLGADSFKKIVGKLGVTSLHA 1208
+ + T++ F ++Q D FT+ P+ + IV G+ L A
Sbjct: 554 RSVYQATLSYSFQAYDEQ--DGFTEYLSPILRGTIMYIVSMFGLAGLEA 600
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 222 bits (566), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 154/226 (68%), Gaps = 1/226 (0%)
Query: 888 IFVLVYVDDIIITGNNDSAISKLKSYLDHTFSLKDLGPLKYFLGIEVSRSSHGLFLCQRK 947
+++L+YVDDI++TG++++ ++ L L TFS+KDLGP+ YFLGI++ GLFL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 948 YALDILKDSGLTASKPSPFPMEQKLRLTPTDGDPLPDPSVYRRLIGRLLYLTVTRPDITF 1007
YA IL ++G+ KP P+ KL + PDPS +R ++G L YLT+TRPDI++
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 1008 ADNNLSQFMQRPMTTHLDAAHRILRYIKGSLGNGIFLSSSSSLHLTGYCDSDWASCPSTR 1067
A N + Q M P D R+LRY+KG++ +G+++ +S L++ +CDSDWA C STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 1068 RSTTGYFTMLGSSPLSWKSKKQLTVSRSSAEAEYRALAVLSCELQW 1113
RSTTG+ T LG + +SW +K+Q TVSRSS E EYRALA+ + EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT1G21280.1 | Copia-like polyprotein/retrotransposon |
Chr1:7447690-7448403 REVERSE LENGTH=237 | 201606
Length = 237
Score = 120 bits (300), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 114/226 (50%), Gaps = 15/226 (6%)
Query: 12 TLPPVSTQSSPVF---DVHHSDSPTTVLVTPL-LSGDNYSSWARAMKMALRGKDKLGFVD 67
++ P S SP + D+HH P+ + L DNY +W + LR K GF+D
Sbjct: 7 SVSPTSDPDSPYYLPPDIHH---PSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFID 63
Query: 68 GTIPQPSSPSELHS-WNRCNDLVASWLMNSVSEDIRSSILYDNNAADIWQNLHDRYFQTN 126
GT+P+P S L+ W +CN +V WLMNS+++ + S++Y A +W++L +
Sbjct: 64 GTLPKPDPFSPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDLRRVFVPCV 123
Query: 127 APKIFQLKRAISSLKQEGSDVSSYFTHLKTLQDELYSLMVIEPCICGH-----GKSILDR 181
KI+QL+R +++L+Q G V YF L + EL I C CG K +
Sbjct: 124 DLKIYQLRRRLATLRQGGDSVEEYFGKLSKVWMELSEYAPIPECKCGGCNCECTKRAEEA 183
Query: 182 SNQERAMEFLQG--LHDCFSTIRSQILLMDPFPSILRIHSLVKQEE 225
+E+ EFL G L+ F + ++I+ P PS+ ++VK E
Sbjct: 184 REKEQRYEFLMGLKLNQGFEAVTTKIMFQKPPPSLHEAFAMVKDAE 229
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 108 bits (269), Expect = 1e-26, Method: Composition-based stats.
Identities = 47/112 (41%), Positives = 72/112 (64%)
Query: 687 PHKALLTSILSSREPSNFSEAMTSPHWREAMSNEIKALETNKTWSIVPLPPGKRPSGCKW 746
P +L + +EP + A+ P W +AM E+ AL NKTW +VP P + GCKW
Sbjct: 14 PKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKW 73
Query: 747 VYKIKFKSDGSIERYKARLVAKGYTQIEGLDYTDTFAPVAKLVTVKVLLSIA 798
V+K K SDG+++R KARLVAKG+ Q EG+ + +T++PV + T++ +L++A
Sbjct: 74 VFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125