BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0370.1
(172 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13200.2 | GRAM domain family protein | Chr5:4207081-4207812 ... 97 5e-25
AT5G13200.1 | GRAM domain family protein | Chr5:4207081-4208079 ... 96 2e-24
>AT5G13200.2 | GRAM domain family protein | Chr5:4207081-4207812
FORWARD LENGTH=213 | 201606
Length = 213
Score = 96.7 bits (239), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 75 PSSSVPPVTTDEKWGTYVMGHPAAPSSHPDNQKAALWSAQD----HHQPYVQYSPVEKP- 129
PSSS P +KWGT+VMG PAAP +HPDNQ+AA W A D +QPYV YSPVE P
Sbjct: 29 PSSSSP---DQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPT 85
Query: 130 NKSPMESVVDVFNSWTNKAETLANNIWLNCK 160
+P+E V+ +F++W+ KAET+A N+W N K
Sbjct: 86 TNNPLEPVIGMFHTWSRKAETVARNLWHNLK 116
>AT5G13200.1 | GRAM domain family protein | Chr5:4207081-4208079
FORWARD LENGTH=272 | 201606
Length = 272
Score = 96.3 bits (238), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 8/91 (8%)
Query: 75 PSSSVPPVTTDEKWGTYVMGHPAAPSSHPDNQKAALWSAQD----HHQPYVQYSPVEKP- 129
PSSS P +KWGT+VMG PAAP +HPDNQ+AA W A D +QPYV YSPVE P
Sbjct: 29 PSSSSP---DQKKWGTHVMGAPAAPVAHPDNQQAAAWVAGDNQQTQYQPYVIYSPVEHPT 85
Query: 130 NKSPMESVVDVFNSWTNKAETLANNIWLNCK 160
+P+E V+ +F++W+ KAET+A N+W N K
Sbjct: 86 TNNPLEPVIGMFHTWSRKAETVARNLWHNLK 116