BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0430.1
(158 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G13220.6 | jasmonate-zim-domain protein 10 | Chr5:4219001-421... 65 1e-13
AT5G13220.3 | jasmonate-zim-domain protein 10 | Chr5:4219001-421... 65 1e-13
AT5G13220.2 | jasmonate-zim-domain protein 10 | Chr5:4219001-421... 65 1e-13
AT5G13220.4 | jasmonate-zim-domain protein 10 | Chr5:4219001-422... 65 1e-13
AT5G13220.1 | jasmonate-zim-domain protein 10 | Chr5:4219001-422... 65 2e-13
>AT5G13220.6 | jasmonate-zim-domain protein 10 |
Chr5:4219001-4219689 FORWARD LENGTH=166 | 201606
Length = 166
Score = 65.1 bits (157), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 1 MSRVPVELDFLGVNPKQNSSSSKP---------TTFLGMPNAICKINPHILKTVISSQTK 51
MS+ +ELDFLG+ KQ +++ KP +F + AI KI+P I+K++++S
Sbjct: 1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS--- 57
Query: 52 SLNQEEDSEPEAEAEAEAEED------NQISSSLLPAITK-----CPLTIFYNGTVSVFH 100
+ N + S + ED + + +SL + T+ P+TIFYNG+VSVF
Sbjct: 58 TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQ 117
Query: 101 LPTHKAAEILMNLAENESK 119
+ +KA EI+ E SK
Sbjct: 118 VSRNKAGEIMKVANEAASK 136
>AT5G13220.3 | jasmonate-zim-domain protein 10 |
Chr5:4219001-4219996 FORWARD LENGTH=185 | 201606
Length = 185
Score = 65.5 bits (158), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 1 MSRVPVELDFLGVNPKQNSSSSKP---------TTFLGMPNAICKINPHILKTVISSQTK 51
MS+ +ELDFLG+ KQ +++ KP +F + AI KI+P I+K++++S
Sbjct: 1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS--- 57
Query: 52 SLNQEEDSEPEAEAEAEAEED------NQISSSLLPAITK-----CPLTIFYNGTVSVFH 100
+ N + S + ED + + +SL + T+ P+TIFYNG+VSVF
Sbjct: 58 TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQ 117
Query: 101 LPTHKAAEILMNLAENESK 119
+ +KA EI+ E SK
Sbjct: 118 VSRNKAGEIMKVANEAASK 136
>AT5G13220.2 | jasmonate-zim-domain protein 10 |
Chr5:4219001-4219996 FORWARD LENGTH=185 | 201606
Length = 185
Score = 65.5 bits (158), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 1 MSRVPVELDFLGVNPKQNSSSSKP---------TTFLGMPNAICKINPHILKTVISSQTK 51
MS+ +ELDFLG+ KQ +++ KP +F + AI KI+P I+K++++S
Sbjct: 1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS--- 57
Query: 52 SLNQEEDSEPEAEAEAEAEED------NQISSSLLPAITK-----CPLTIFYNGTVSVFH 100
+ N + S + ED + + +SL + T+ P+TIFYNG+VSVF
Sbjct: 58 TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQ 117
Query: 101 LPTHKAAEILMNLAENESK 119
+ +KA EI+ E SK
Sbjct: 118 VSRNKAGEIMKVANEAASK 136
>AT5G13220.4 | jasmonate-zim-domain protein 10 |
Chr5:4219001-4220467 FORWARD LENGTH=167 | 201606
Length = 167
Score = 65.1 bits (157), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 73/140 (52%), Gaps = 25/140 (17%)
Query: 1 MSRVPVELDFLGVNPKQNSSSSKP---------TTFLGMPNAICKINPHILKTVISSQTK 51
MS+ +ELDFLG+ KQ +++ KP +F + AI KI+P I+K++++S
Sbjct: 1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS--- 57
Query: 52 SLNQEEDSEPEAEAEAEAEEDNQ-------ISSSLLPAITK-----CPLTIFYNGTVSVF 99
DS ++ + ++Q + +SL + T+ P+TIFYNG+VSVF
Sbjct: 58 -TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVF 116
Query: 100 HLPTHKAAEILMNLAENESK 119
+ +KA EI+ E SK
Sbjct: 117 QVSRNKAGEIMKVANEAASK 136
>AT5G13220.1 | jasmonate-zim-domain protein 10 |
Chr5:4219001-4220502 FORWARD LENGTH=197 | 201606
Length = 197
Score = 65.1 bits (157), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 1 MSRVPVELDFLGVNPKQNSSSSKP---------TTFLGMPNAICKINPHILKTVISSQTK 51
MS+ +ELDFLG+ KQ +++ KP +F + AI KI+P I+K++++S
Sbjct: 1 MSKATIELDFLGLEKKQTNNAPKPKFQKFLDRRRSFRDIQGAISKIDPEIIKSLLAS--- 57
Query: 52 SLNQEEDSEPEAEAEAEAEED------NQISSSLLPAITK-----CPLTIFYNGTVSVFH 100
+ N + S + ED + + +SL + T+ P+TIFYNG+VSVF
Sbjct: 58 TGNNSDSSAKSRSVPSTPREDQPQIPISPVHASLARSSTELVSGTVPMTIFYNGSVSVFQ 117
Query: 101 LPTHKAAEILMNLAENESK 119
+ +KA EI+ E SK
Sbjct: 118 VSRNKAGEIMKVANEAASK 136