BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0450.1
(426 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 56 4e-09
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 47 2e-05
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 47 2e-05
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 56.2 bits (134), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 372 LPSKPTTYEEAAKHTAWVQAMNEEYQALLDNQTWSLVPYHSKMNVLGCKWVFQLK 426
+ +P + A K W QAM EE AL N+TW LVP N+LGCKWVF+ K
Sbjct: 24 IKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTK 78
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 365 AYLSILHLPSKPTTYEEAAKHTAWVQAMNEEYQALLDNQTWSLVPYHSKMNVLGCKWVFQ 424
++L + +P+TY EA + W AM++E A+ TW + +GCKWV++
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 425 LK 426
+K
Sbjct: 135 IK 136
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%)
Query: 365 AYLSILHLPSKPTTYEEAAKHTAWVQAMNEEYQALLDNQTWSLVPYHSKMNVLGCKWVFQ 424
++L + +P+TY EA + W AM++E A+ TW + +GCKWV++
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 425 LK 426
+K
Sbjct: 135 IK 136