BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0460.1
(632 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 3e-49
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 185 3e-49
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 147 3e-40
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 80 1e-17
AT3G26790.1 | AP2/B3-like transcriptional factor family protein ... 73 1e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (470), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 134/224 (59%), Gaps = 4/224 (1%)
Query: 111 LPVSSGKRVSLTEGDDLSNPNEYRSLLGALQYLTLTRPDVSFALNYTSQFMHKPTTVHLV 170
+P+ S G D + YR L+G L YL +TR D+SFA+N SQF P H
Sbjct: 356 VPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQ 415
Query: 171 VVKKILRYLKGS---GITLSASDLTTLTAYSDSDWAGCPDSRKSTGGYCIFLGSSLISWS 227
V KIL Y+KG+ G+ S+ L +SD+ + C D+R+ST GYC+FLG+SLISW
Sbjct: 416 AVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 475
Query: 228 SKKQATVAKSSTEAECKSLSNTATELVWLSYLMDELRFPLTRPFHLFCDNISAKYLASNP 287
SKKQ V+KSS EAE ++LS E++WL+ EL+ PL++P LFCDN +A ++A+N
Sbjct: 476 SKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 535
Query: 288 IFHARTKHIEVDFHYVRDLISNDSVIVNHISTTDQLADIFTEGL 331
+FH RTKHIE D H VR+ + + D+ D FTE L
Sbjct: 536 VFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYL 578
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 1 MVLTIAITKSWHIKQLDVSNAFLHGILDEDVYMIQPPGFVKPGTDKL----VCHLHKALY 56
++L I+ ++ + QLD+SNAFL+G LDE++YM PPG+ D L VC+L K++Y
Sbjct: 178 LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237
Query: 57 GLHRLQGHGSTSLPISYWLMDFRKANLIIQCLFFISHLQQCYFI 100
GL + W + F + +I F SH YF+
Sbjct: 238 GLKQASRQ---------WFLKF--SVTLIGFGFVQSHSDHTYFL 270
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 185 bits (470), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 134/224 (59%), Gaps = 4/224 (1%)
Query: 111 LPVSSGKRVSLTEGDDLSNPNEYRSLLGALQYLTLTRPDVSFALNYTSQFMHKPTTVHLV 170
+P+ S G D + YR L+G L YL +TR D+SFA+N SQF P H
Sbjct: 356 VPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQ 415
Query: 171 VVKKILRYLKGS---GITLSASDLTTLTAYSDSDWAGCPDSRKSTGGYCIFLGSSLISWS 227
V KIL Y+KG+ G+ S+ L +SD+ + C D+R+ST GYC+FLG+SLISW
Sbjct: 416 AVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWK 475
Query: 228 SKKQATVAKSSTEAECKSLSNTATELVWLSYLMDELRFPLTRPFHLFCDNISAKYLASNP 287
SKKQ V+KSS EAE ++LS E++WL+ EL+ PL++P LFCDN +A ++A+N
Sbjct: 476 SKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNA 535
Query: 288 IFHARTKHIEVDFHYVRDLISNDSVIVNHISTTDQLADIFTEGL 331
+FH RTKHIE D H VR+ + + D+ D FTE L
Sbjct: 536 VFHERTKHIESDCHSVRERSVYQATLSYSFQAYDE-QDGFTEYL 578
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 15/104 (14%)
Query: 1 MVLTIAITKSWHIKQLDVSNAFLHGILDEDVYMIQPPGFVKPGTDKL----VCHLHKALY 56
++L I+ ++ + QLD+SNAFL+G LDE++YM PPG+ D L VC+L K++Y
Sbjct: 178 LILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIY 237
Query: 57 GLHRLQGHGSTSLPISYWLMDFRKANLIIQCLFFISHLQQCYFI 100
GL + W + F + +I F SH YF+
Sbjct: 238 GLKQASRQ---------WFLKF--SVTLIGFGFVQSHSDHTYFL 270
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 147 bits (371), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 113/175 (64%), Gaps = 14/175 (8%)
Query: 94 LQQCYFIDQI--------CWIQSHLLPVSSGKRVSLTEGDDLSNPNEYRSLLGALQYLTL 145
L Q + +QI C S LP+ VS + D P+++RS++GALQYLTL
Sbjct: 56 LSQTKYAEQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPD---PSDFRSIVGALQYLTL 112
Query: 146 TRPDVSFALNYTSQFMHKPTTVHLVVVKKILRYLKGS---GITLSASDLTTLTAYSDSDW 202
TRPD+S+A+N Q MH+PT ++K++LRY+KG+ G+ + + + A+ DSDW
Sbjct: 113 TRPDISYAVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDW 172
Query: 203 AGCPDSRKSTGGYCIFLGSSLISWSSKKQATVAKSSTEAECKSLSNTATELVWLS 257
AGC +R+ST G+C FLG ++ISWS+K+Q TV++SSTE E ++L+ TA EL W S
Sbjct: 173 AGCTSTRRSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTWSS 227
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 79.7 bits (195), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
Query: 142 YLTLTRPDVSFALNYTSQFMHKPTTVHLVVVKKILRYLKGS---GITLSASDLTTLTAYS 198
YLT+TRPD++FA+N SQF T + V K+L Y+KG+ G+ SA+ L A++
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 199 DSDWAGCPDSRKSTGGYC 216
DSDWA CPD+R+S G+C
Sbjct: 62 DSDWASCPDTRRSVTGFC 79
>AT3G26790.1 | AP2/B3-like transcriptional factor family protein |
Chr3:9854025-9855748 REVERSE LENGTH=313 | 201606
Length = 313
Score = 72.8 bits (177), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 20/119 (16%)
Query: 431 CKEIEPRRQLRFLLQKELRHSDVSTLGRIILPK---------------VWFKYEAFILFQ 475
++I+PR+ LRFL QKEL++SDVS+L R+ILPK + + E F
Sbjct: 80 ARKIDPRK-LRFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFH 138
Query: 476 LYSWIHVAMLKHNSIMLSPHDEKFSYSGFVRTHGLRVGDFMMLYKDDQSERYVIRARKA 534
++++ + +NS M + FV HGL++GDF+M+Y+D S YVI+ARKA
Sbjct: 139 VWTFKYRYWPNNNSRMYVLENT----GDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKA 193