BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000033.1_g0590.1
(1000 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 280 3e-79
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 280 3e-79
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 135 2e-36
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 129 2e-33
AT5G48050.1 | Copia-like polyprotein/retrotransposon | Chr5:1947... 58 3e-08
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 280 bits (716), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 201/331 (60%), Gaps = 5/331 (1%)
Query: 576 PLSQSFLTMLLHHKEPTTFKEAASDPKWVKAMEEEFQALQKNRTWSLVPHEKSMNLLGCK 635
PL SFL + KEP+T+ EA W AM++E A++ TW + + +GCK
Sbjct: 71 PLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCK 130
Query: 636 WVFKVKYKSDGSVERFKARLVAKGYHQKDGLDYSETFSPVVKAATIRTILNVAVSKGWHI 695
WV+K+KY SDG++ER+KARLVAKGY Q++G+D+ ETFSPV K +++ IL ++ + +
Sbjct: 131 WVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 190
Query: 696 QQLDVSNAFLHEILQENFYMKQPQGFI----DPACPFHVCHLHKSLYGLKQAPRAWFQKF 751
QLD+SNAFL+ L E YMK P G+ D P VC+L KS+YGLKQA R WF KF
Sbjct: 191 HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 250
Query: 752 GTFLQTLNFQRSAHDHSMFIQHNSDSMLVLLLYVDDIILTGTSTTLMNNLIITLGKEFAM 811
L F +S DH+ F++ + L +L+YVDDII+ + ++ L L F +
Sbjct: 251 SVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKL 310
Query: 812 KDLRPLHFFLGIEVSRADSSALFLTQKKYALGLLENADLLDAKPSITPVSGGNRLSKFDG 871
+DL PL +FLG+E++R+ ++ + + Q+KYAL LL+ LL KPS P+ S G
Sbjct: 311 RDLGPLKYFLGLEIARS-AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 872 TLLTDPSHYRSIIGGLQYLTMTRPDLAYAVN 902
D YR +IG L YL +TR D+++AVN
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 280 bits (716), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/331 (42%), Positives = 201/331 (60%), Gaps = 5/331 (1%)
Query: 576 PLSQSFLTMLLHHKEPTTFKEAASDPKWVKAMEEEFQALQKNRTWSLVPHEKSMNLLGCK 635
PL SFL + KEP+T+ EA W AM++E A++ TW + + +GCK
Sbjct: 71 PLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCK 130
Query: 636 WVFKVKYKSDGSVERFKARLVAKGYHQKDGLDYSETFSPVVKAATIRTILNVAVSKGWHI 695
WV+K+KY SDG++ER+KARLVAKGY Q++G+D+ ETFSPV K +++ IL ++ + +
Sbjct: 131 WVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTL 190
Query: 696 QQLDVSNAFLHEILQENFYMKQPQGFI----DPACPFHVCHLHKSLYGLKQAPRAWFQKF 751
QLD+SNAFL+ L E YMK P G+ D P VC+L KS+YGLKQA R WF KF
Sbjct: 191 HQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKF 250
Query: 752 GTFLQTLNFQRSAHDHSMFIQHNSDSMLVLLLYVDDIILTGTSTTLMNNLIITLGKEFAM 811
L F +S DH+ F++ + L +L+YVDDII+ + ++ L L F +
Sbjct: 251 SVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKL 310
Query: 812 KDLRPLHFFLGIEVSRADSSALFLTQKKYALGLLENADLLDAKPSITPVSGGNRLSKFDG 871
+DL PL +FLG+E++R+ ++ + + Q+KYAL LL+ LL KPS P+ S G
Sbjct: 311 RDLGPLKYFLGLEIARS-AAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSG 369
Query: 872 TLLTDPSHYRSIIGGLQYLTMTRPDLAYAVN 902
D YR +IG L YL +TR D+++AVN
Sbjct: 370 GDFVDAKAYRRLIGRLMYLQITRLDISFAVN 400
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 135 bits (341), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 64/116 (55%), Positives = 83/116 (71%), Gaps = 7/116 (6%)
Query: 589 KEPTTFKEAASDPKWVKAMEEEFQALQKNRTWSLVPHEKSMNLLGCKWVFKVKYKSDGSV 648
KEP + A DP W +AM+EE AL +N+TW LVP + N+LGCKWVFK K SDG++
Sbjct: 26 KEPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTL 85
Query: 649 ERFKARLVAKGYHQKDGLDYSETFSPVVKAATIRTILNVAVSKGWHIQQLDVSNAF 704
+R KARLVAKG+HQ++G+ + ET+SPVV+ ATIRTILNVA QQL+V +
Sbjct: 86 DRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA-------QQLEVGQSI 134
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 129 bits (324), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 10/128 (7%)
Query: 779 LVLLLYVDDIILTGTSTTLMNNLIITLGKEFAMKDLRPLHFFLGIEVSRADSSALFLTQK 838
+ LLLYVDDI+LTG+S TL+N LI L F+MKDL P+H+FLGI++ + S LFL+Q
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQI-KTHPSGLFLSQT 59
Query: 839 KYALGLLENADLLDAKPSITPVSGGNRLSKFDGTLLT----DPSHYRSIIGGLQYLTMTR 894
KYA +L NA +LD KP TP+ K + ++ T DPS +RSI+G LQYLT+TR
Sbjct: 60 KYAEQILNNAGMLDCKPMSTPLP-----LKLNSSVSTAKYPDPSDFRSIVGALQYLTLTR 114
Query: 895 PDLAYAVN 902
PD++YAVN
Sbjct: 115 PDISYAVN 122
>AT5G48050.1 | Copia-like polyprotein/retrotransposon |
Chr5:19472661-19473770 REVERSE LENGTH=369 | 201606
Length = 369
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 63/119 (52%), Gaps = 1/119 (0%)
Query: 3 ATFTHSISSDVLRL-CTSREIWSFLEQNYVEEYEAKIASLREQIQNIKRGDSSATDYLRR 61
T T S+ ++++ CT+R++W LE + + EA+ +++ D S +Y ++
Sbjct: 80 GTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQK 139
Query: 62 IKVLSDSLIVVNERLSDKELSRIVLKGLGREYRTFVVAIHNRESSITFSELRTRIIHHE 120
+K LSD L V+ +SD+ L +L GL +Y + I ++ +F+E R+ ++ E
Sbjct: 140 LKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEE 198