BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0070.1
(101 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G10290.1 | Nucleotide-sugar transporter family protein | Chr3... 151 3e-46
AT5G04160.1 | Nucleotide-sugar transporter family protein | Chr5... 150 6e-46
AT3G11320.1 | Nucleotide-sugar transporter family protein | Chr3... 121 7e-35
AT5G05820.1 | Nucleotide-sugar transporter family protein | Chr5... 119 6e-34
AT1G12500.1 | Nucleotide-sugar transporter family protein | Chr1... 95 2e-24
>AT3G10290.1 | Nucleotide-sugar transporter family protein |
Chr3:3183511-3185324 REVERSE LENGTH=355 | 201606
Length = 355
Score = 151 bits (382), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 76/101 (75%), Positives = 84/101 (83%)
Query: 1 MCISAMTARAFKYVLQGVLLSSEGEKLNSMNLMLYMSPIAVLVLLPATIVMEPQLPDTIH 60
MCISA ARAFK VLQG+LLSSEGE+LNSMNLMLYMSPIAV+ LLP TI MEP +
Sbjct: 208 MCISATAARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIALLPVTIFMEPDVMSVTL 267
Query: 61 LLGRKHKFMWILLMVNSVMAYGANFSNFLVIKHTSALTLQV 101
LGR+HK+M+ILL+VNSVMAY AN NFLV KHTSALTLQV
Sbjct: 268 TLGRQHKYMYILLLVNSVMAYSANLLNFLVTKHTSALTLQV 308
>AT5G04160.1 | Nucleotide-sugar transporter family protein |
Chr5:1143033-1144777 REVERSE LENGTH=309 | 201606
Length = 309
Score = 150 bits (378), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 74/101 (73%), Positives = 83/101 (82%)
Query: 1 MCISAMTARAFKYVLQGVLLSSEGEKLNSMNLMLYMSPIAVLVLLPATIVMEPQLPDTIH 60
MCISA ARAFK VLQG+LLSSEGEKLNSMNLMLYMSPIAV+ LLP T+ MEP +
Sbjct: 162 MCISATAARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTL 221
Query: 61 LLGRKHKFMWILLMVNSVMAYGANFSNFLVIKHTSALTLQV 101
L ++H++MWILL+VNSVMAY AN NFLV KHTSALTLQV
Sbjct: 222 TLAKQHQYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQV 262
>AT3G11320.1 | Nucleotide-sugar transporter family protein |
Chr3:3547017-3548539 REVERSE LENGTH=308 | 201606
Length = 308
Score = 121 bits (304), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 65/102 (63%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 1 MCISAMTARAFKYVLQGVLLSSEGEKLNSMNLMLYMSPIAVLVLLPATIVMEPQLPD-TI 59
MCI+A ARA K VLQG+LLSSEGEKLNSMNL+LYM+PIAV+ LLPAT++ME + TI
Sbjct: 161 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITI 220
Query: 60 HLLGRKHKFMWILLMVNSVMAYGANFSNFLVIKHTSALTLQV 101
L + +W LL NS +AY N +NFLV KHTSALTLQV
Sbjct: 221 ALARDDFRIVWYLLF-NSALAYFVNLTNFLVTKHTSALTLQV 261
>AT5G05820.1 | Nucleotide-sugar transporter family protein |
Chr5:1752106-1753857 REVERSE LENGTH=309 | 201606
Length = 309
Score = 119 bits (297), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 64/102 (62%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
Query: 1 MCISAMTARAFKYVLQGVLLSSEGEKLNSMNLMLYMSPIAVLVLLPATIVMEPQLPD-TI 59
MCI+A ARA K VLQG+LLSSEGEKLNSMNL+LYM+PIAV++LLPAT++ME + TI
Sbjct: 161 MCIAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITI 220
Query: 60 HLLGRKHKFMWILLMVNSVMAYGANFSNFLVIKHTSALTLQV 101
L + +W LL NS +AY N +NFLV HTSALTLQV
Sbjct: 221 ALARDDFRIVWYLLF-NSALAYLVNLTNFLVTNHTSALTLQV 261
>AT1G12500.1 | Nucleotide-sugar transporter family protein |
Chr1:4263542-4264957 REVERSE LENGTH=361 | 201606
Length = 361
Score = 95.1 bits (235), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 69/101 (68%)
Query: 1 MCISAMTARAFKYVLQGVLLSSEGEKLNSMNLMLYMSPIAVLVLLPATIVMEPQLPDTIH 60
+C+++ RA K V+QG++L+SE EKL+SMNL+LYM+P+A +LLP T+ +E + +
Sbjct: 209 ICVASTAGRALKSVVQGIILTSESEKLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLI 268
Query: 61 LLGRKHKFMWILLMVNSVMAYGANFSNFLVIKHTSALTLQV 101
R + LL N+ +AY N +NFLV KHTSALTLQV
Sbjct: 269 EKARTDPLIIFLLAGNATVAYLVNLTNFLVTKHTSALTLQV 309