BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0080.1
(248 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1... 88 1e-19
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1... 50 9e-07
>AT1G43760.1 | DNAse I-like superfamily protein |
Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
Length = 626
Score = 88.2 bits (217), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 4/190 (2%)
Query: 14 ESLWKEKSRNNFISVGDKSTKYFHSQAIQRNRNNKIRAIKDTNGDWQDDMNSIHTIFTDH 73
ES +++KSR ++ GD +T++FH + N I+ ++ + +++ + + +
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491
Query: 74 LLHINTTENTSIAPELLNLFQPSITSQQN----YMLCAVPEEEEINQAIAGLKKDAAPGP 129
H+ +++ + P+ + + + N L A+P ++EI A+ + ++ APGP
Sbjct: 492 YTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGP 551
Query: 130 DGYPPFFFQANWDTVSLDIHSLVQQFFTTATLPNEANHTHICLIPKTTSPQTPADYRPIS 189
D + FF +W V + V++FF T L N T I LIPK T + +RP+S
Sbjct: 552 DSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVS 611
Query: 190 LLNTTYKIIT 199
YKIIT
Sbjct: 612 CCTVVYKIIT 621
>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
Length = 376
Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 202 LADRLKDTLKEIISPFQAAYIPGRQISDNIIIGQEIIHSMKKMEG 246
+ +RLK + +I P QA++IPGR +DNI+ QE +HSM++ +G
Sbjct: 1 MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKG 45