BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g0080.1
         (248 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G43760.1 | DNAse I-like superfamily protein | Chr1:16528880-1...    88   1e-19
AT4G20520.1 | RNA binding / RNA-directed DNA polymerase | Chr4:1...    50   9e-07

>AT1G43760.1 | DNAse I-like superfamily protein |
           Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606
          Length = 626

 Score = 88.2 bits (217), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 14  ESLWKEKSRNNFISVGDKSTKYFHSQAIQRNRNNKIRAIKDTNGDWQDDMNSIHTIFTDH 73
           ES +++KSR  ++  GD +T++FH   +     N I+ ++  +    +++  +  +   +
Sbjct: 432 ESFYRQKSRIKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAY 491

Query: 74  LLHINTTENTSIAPELLNLFQPSITSQQN----YMLCAVPEEEEINQAIAGLKKDAAPGP 129
             H+  +++  + P+ +   +     + N      L A+P ++EI  A+  + ++ APGP
Sbjct: 492 YTHLLGSDSDILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGP 551

Query: 130 DGYPPFFFQANWDTVSLDIHSLVQQFFTTATLPNEANHTHICLIPKTTSPQTPADYRPIS 189
           D +   FF  +W  V     + V++FF T  L    N T I LIPK T     + +RP+S
Sbjct: 552 DSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVS 611

Query: 190 LLNTTYKIIT 199
                YKIIT
Sbjct: 612 CCTVVYKIIT 621


>AT4G20520.1 | RNA binding / RNA-directed DNA polymerase |
           Chr4:11045912-11047716 FORWARD LENGTH=376 | 201606
          Length = 376

 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 20/45 (44%), Positives = 32/45 (71%)

Query: 202 LADRLKDTLKEIISPFQAAYIPGRQISDNIIIGQEIIHSMKKMEG 246
           + +RLK  +  +I P QA++IPGR  +DNI+  QE +HSM++ +G
Sbjct: 1   MVERLKPLMTNLIGPAQASFIPGRVSTDNIVFVQEAVHSMRRKKG 45


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