BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0330.1
(128 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 86 1e-22
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 86.3 bits (212), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 50/83 (60%)
Query: 36 MNRTLLEQARCMLSNAGLPEVFWVQAVNTTAYLVNISPCTSIECKTPNEVWSGYPGNYEN 95
MNRT++E+ R ML GLP+ F A NT +++N P T+I P+EVW Y
Sbjct: 1 MNRTIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSY 60
Query: 96 LRIFGCSAYAHVKEGKLDPRAKK 118
LR FGC AY H EGKL PRAKK
Sbjct: 61 LRRFGCVAYIHCDEGKLKPRAKK 83