BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0340.1
(372 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 168 8e-46
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 168 8e-46
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 68 3e-13
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 65 5e-12
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 168 bits (426), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 167/313 (53%), Gaps = 41/313 (13%)
Query: 93 EPCTYEEAMRSDDSRQWSLAMNEEIESLRKNQFWELAEHPKGQKIVCSKRVFEKKEGIPR 152
EP TY EA + W AM++EI ++ WE+ P +K + K V++ K
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 153 VEDARYKAQLVAKGFTQREGIDFNEVFSLVVKHSSIRVILALIALYDMELEQLDVKTAFL 212
+ RYKA+LVAKG+TQ+EGIDF E FS V K +S+++ILA+ A+Y+ L QLD+ AFL
Sbjct: 142 TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 213 HGELEEQIYMRQPEGFEILEKE----DQVCLLKKSLYGLKQSPRQ--------------- 253
+G+L+E+IYM+ P G+ + + + VC LKKS+YGLKQ+ RQ
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260
Query: 254 ----------KLSDGSYVYLLLYVDDMLIACKDMSEIHMLKDQLKGEFEMKDLDASRKIL 303
K++ ++ +L+YVDD++I + + + LK QLK F+++DL + L
Sbjct: 261 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320
Query: 304 SMKIQRDISVGKRFLSQKTYIEKVLECFGMTEAKPISTPLAAHFKIS----GELSPTTVT 359
++I R S + Q+ Y +L+ G+ KP S P+ S G+
Sbjct: 321 GLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 360 RRSTCLGCLMQMQ 372
RR +G LM +Q
Sbjct: 379 RR--LIGRLMYLQ 389
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 168 bits (426), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 167/313 (53%), Gaps = 41/313 (13%)
Query: 93 EPCTYEEAMRSDDSRQWSLAMNEEIESLRKNQFWELAEHPKGQKIVCSKRVFEKKEGIPR 152
EP TY EA + W AM++EI ++ WE+ P +K + K V++ K
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 153 VEDARYKAQLVAKGFTQREGIDFNEVFSLVVKHSSIRVILALIALYDMELEQLDVKTAFL 212
+ RYKA+LVAKG+TQ+EGIDF E FS V K +S+++ILA+ A+Y+ L QLD+ AFL
Sbjct: 142 TIE-RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFL 200
Query: 213 HGELEEQIYMRQPEGFEILEKE----DQVCLLKKSLYGLKQSPRQ--------------- 253
+G+L+E+IYM+ P G+ + + + VC LKKS+YGLKQ+ RQ
Sbjct: 201 NGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFV 260
Query: 254 ----------KLSDGSYVYLLLYVDDMLIACKDMSEIHMLKDQLKGEFEMKDLDASRKIL 303
K++ ++ +L+YVDD++I + + + LK QLK F+++DL + L
Sbjct: 261 QSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFL 320
Query: 304 SMKIQRDISVGKRFLSQKTYIEKVLECFGMTEAKPISTPLAAHFKIS----GELSPTTVT 359
++I R S + Q+ Y +L+ G+ KP S P+ S G+
Sbjct: 321 GLEIAR--SAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAY 378
Query: 360 RRSTCLGCLMQMQ 372
RR +G LM +Q
Sbjct: 379 RR--LIGRLMYLQ 389
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 67.8 bits (164), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 109 WSLAMNEEIESLRKNQFWELAEHPKGQKIVCSKRVFEKKEGIPRVEDARYKAQLVAKGFT 168
W AM EE+++L +N+ W L P Q I+ K VF+ K D R KA+LVAKGF
Sbjct: 40 WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD-RLKARLVAKGFH 98
Query: 169 QREGIDFNEVFSLVVKHSSIRVIL 192
Q EGI F E +S VV+ ++IR IL
Sbjct: 99 QEEGIYFVETYSPVVRTATIRTIL 122
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Query: 261 VYLLLYVDDMLIACKDMSEIHMLKDQLKGEFEMKDLDASRKILSMKIQRDISVGKRFLSQ 320
+YLLLYVDD+L+ + ++ML QL F MKDL L ++I+ S FLSQ
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPS--GLFLSQ 58
Query: 321 KTYIEKVLECFGMTEAKPISTPL 343
Y E++L GM + KP+STPL
Sbjct: 59 TKYAEQILNNAGMLDCKPMSTPL 81