BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0390.1
(182 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 144 6e-43
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 124 3e-33
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 124 3e-33
ATMG00240.1 | Gag-Pol-related retrotransposon family protein | C... 56 2e-10
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 144 bits (362), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 80/170 (47%), Positives = 108/170 (63%), Gaps = 1/170 (0%)
Query: 13 LLLYVDDIIVTGSSSLELHQLIQRLKSKFDMSDMGDLTYLLGIEASRDSTSITLTQTKYI 72
LLLYVDDI++TGSS+ L+ LI +L S F M D+G + Y LGI+ + + L+QTKY
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 73 NDLLQKYGMLHSKPVSTPVLSGKKLSKLDGEPLSDSYPFRSLVGALQYLTMTRPDICYAV 132
+L GML KP+STP L K S + D FRS+VGALQYLT+TRPDI YAV
Sbjct: 63 EQILNNAGMLDCKPMSTP-LPLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAV 121
Query: 133 NQVSKFMSSPSSIHLIVVKRILRYLKGSINEGICIRKSLSMPILGFSDAD 182
N V + M P+ ++KR+LRY+KG+I G+ I K+ + + F D+D
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSD 171
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 124 bits (312), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 98/170 (57%)
Query: 12 ILLLYVDDIIVTGSSSLELHQLIQRLKSKFDMSDMGDLTYLLGIEASRDSTSITLTQTKY 71
+L+YVDDII+ ++ + +L +LKS F + D+G L Y LG+E +R + I + Q KY
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 72 INDLLQKYGMLHSKPVSTPVLSGKKLSKLDGEPLSDSYPFRSLVGALQYLTMTRPDICYA 131
DLL + G+L KP S P+ S G D+ +R L+G L YL +TR DI +A
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 132 VNQVSKFMSSPSSIHLIVVKRILRYLKGSINEGICIRKSLSMPILGFSDA 181
VN++S+F +P H V +IL Y+KG++ +G+ M + FSDA
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 124 bits (312), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 98/170 (57%)
Query: 12 ILLLYVDDIIVTGSSSLELHQLIQRLKSKFDMSDMGDLTYLLGIEASRDSTSITLTQTKY 71
+L+YVDDII+ ++ + +L +LKS F + D+G L Y LG+E +R + I + Q KY
Sbjct: 279 CVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKY 338
Query: 72 INDLLQKYGMLHSKPVSTPVLSGKKLSKLDGEPLSDSYPFRSLVGALQYLTMTRPDICYA 131
DLL + G+L KP S P+ S G D+ +R L+G L YL +TR DI +A
Sbjct: 339 ALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFA 398
Query: 132 VNQVSKFMSSPSSIHLIVVKRILRYLKGSINEGICIRKSLSMPILGFSDA 181
VN++S+F +P H V +IL Y+KG++ +G+ M + FSDA
Sbjct: 399 VNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDA 448
>ATMG00240.1 | Gag-Pol-related retrotransposon family protein |
ChrM:68918-69253 REVERSE LENGTH=111 | 201606
Length = 111
Score = 55.8 bits (133), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 43/63 (68%)
Query: 120 YLTMTRPDICYAVNQVSKFMSSPSSIHLIVVKRILRYLKGSINEGICIRKSLSMPILGFS 179
YLT+TRPD+ +AVN++S+F S+ + + V ++L Y+KG++ +G+ + + + F+
Sbjct: 2 YLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAFA 61
Query: 180 DAD 182
D+D
Sbjct: 62 DSD 64