BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0400.1
(123 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 4e-17
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 77 4e-17
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 76.6 bits (187), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 3 QPTVARSSAEAEYKAVAYTSADVIWLKNLLQELGLQITAPPIVHCDNISATYLAVNPILH 62
Q V++SSAEAEY+A+++ + +++WL +EL L ++ P ++ CDN +A ++A N + H
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 63 FKTRHASIDFHFVREQ-VAAKKLVVKFLPGSEQVADIFTKGLS 104
+T+H D H VRE+ V L F EQ D FT+ LS
Sbjct: 539 ERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 76.6 bits (187), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 3 QPTVARSSAEAEYKAVAYTSADVIWLKNLLQELGLQITAPPIVHCDNISATYLAVNPILH 62
Q V++SSAEAEY+A+++ + +++WL +EL L ++ P ++ CDN +A ++A N + H
Sbjct: 479 QQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFH 538
Query: 63 FKTRHASIDFHFVREQ-VAAKKLVVKFLPGSEQVADIFTKGLS 104
+T+H D H VRE+ V L F EQ D FT+ LS
Sbjct: 539 ERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ--DGFTEYLS 579