BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0410.1
(168 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G53980.1 | homeobox protein 52 | Chr5:21914087-21914557 FORWA... 116 2e-33
AT2G18550.1 | homeobox protein 21 | Chr2:8049663-8051213 REVERSE... 97 4e-25
AT4G36740.2 | homeobox protein 40 | Chr4:17314649-17316314 REVER... 96 1e-24
AT4G36740.1 | homeobox protein 40 | Chr4:17314649-17316314 REVER... 96 1e-24
AT3G01470.1 | homeobox 1 | Chr3:182648-184034 REVERSE LENGTH=272... 93 4e-23
>AT5G53980.1 | homeobox protein 52 | Chr5:21914087-21914557 FORWARD
LENGTH=156 | 201606
Length = 156
Score = 116 bits (290), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 68/155 (43%), Positives = 92/155 (59%), Gaps = 11/155 (7%)
Query: 7 QNHKQAPKRLKKRLTEDQVRLLESNFNHDMKLEPDRKNQLASELGLHPRQVAIWYQNKRA 66
+N + K KKRLT+DQVR LE F + KLEPD K QL+++LGL RQVA+W+QNKRA
Sbjct: 2 ENSQSQGKNKKKRLTQDQVRQLEKCFTMNKKLEPDLKLQLSNQLGLPQRQVAVWFQNKRA 61
Query: 67 RWKNQTLELDYKTLQIRLNGVLAEKRKLEREVGRLRDELMKAQENLVLINPIHVPPSITV 126
R+K Q+LE+ + TLQ + L++K KLE +V L+DEL +A+ L L P +
Sbjct: 62 RFKTQSLEVQHCTLQSKHEAALSDKAKLEHQVQFLQDELKRARNQLALFTNQDSPVDNSN 121
Query: 127 YGDKDEGPSMQVEANRTWGNVGQLHVDELYACLIA 161
G DE QV + DELYAC ++
Sbjct: 122 LGSCDEDHDDQV-----------VVFDELYACFVS 145
>AT2G18550.1 | homeobox protein 21 | Chr2:8049663-8051213 REVERSE
LENGTH=220 | 201606
Length = 220
Score = 97.1 bits (240), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 22/144 (15%)
Query: 17 KKRLTEDQVRLLESNFNHDMKLEPDRKNQLASELGLHPRQVAIWYQNKRARWKNQTLELD 76
K++L+++QVR+LE +F D KLE +RK++LASELGL PRQVA+W+QN+RARWKN+ +E +
Sbjct: 62 KRKLSDEQVRMLEISFEDDHKLESERKDRLASELGLDPRQVAVWFQNRRARWKNKRVEDE 121
Query: 77 YKTLQIRLNGVLAEKRKLEREVGRLRDELMKAQENL-------------------VLINP 117
Y L+ + EK +L+ EV L+++L +A+ + V I
Sbjct: 122 YTKLKNAYETTVVEKCRLDSEVIHLKEQLYEAEREIQRLAKRVEGTLSNSPISSSVTIEA 181
Query: 118 IHVPPSITVYGDKDEGPSMQVEAN 141
H P +GD D G + + N
Sbjct: 182 NHTTP---FFGDYDIGFDGEADEN 202
>AT4G36740.2 | homeobox protein 40 | Chr4:17314649-17316314 REVERSE
LENGTH=217 | 201606
Length = 217
Score = 95.5 bits (236), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 73/96 (76%)
Query: 17 KKRLTEDQVRLLESNFNHDMKLEPDRKNQLASELGLHPRQVAIWYQNKRARWKNQTLELD 76
K++LT++QV +LE +F + KLE +RK++LA+ELGL PRQVA+W+QN+RARWKN+ LE +
Sbjct: 57 KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 116
Query: 77 YKTLQIRLNGVLAEKRKLEREVGRLRDELMKAQENL 112
Y L+ + V+ +K +LE EV +L+++L A+ +
Sbjct: 117 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREI 152
>AT4G36740.1 | homeobox protein 40 | Chr4:17314649-17316314 REVERSE
LENGTH=216 | 201606
Length = 216
Score = 95.5 bits (236), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 73/96 (76%)
Query: 17 KKRLTEDQVRLLESNFNHDMKLEPDRKNQLASELGLHPRQVAIWYQNKRARWKNQTLELD 76
K++LT++QV +LE +F + KLE +RK++LA+ELGL PRQVA+W+QN+RARWKN+ LE +
Sbjct: 56 KRKLTDEQVNMLEMSFGDEHKLESERKDRLAAELGLDPRQVAVWFQNRRARWKNKRLEEE 115
Query: 77 YKTLQIRLNGVLAEKRKLEREVGRLRDELMKAQENL 112
Y L+ + V+ +K +LE EV +L+++L A+ +
Sbjct: 116 YNKLKNSHDNVVVDKCRLESEVIQLKEQLYDAEREI 151
>AT3G01470.1 | homeobox 1 | Chr3:182648-184034 REVERSE LENGTH=272 |
201606
Length = 272
Score = 92.8 bits (229), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 1/102 (0%)
Query: 11 QAPKRLKKRLTEDQVRLLESNFNHDMKLEPDRKNQLASELGLHPRQVAIWYQNKRARWKN 70
Q P++ K+RLT +QV LLE +F + KLEP+RK QLA +LGL PRQVA+W+QN+RARWK
Sbjct: 64 QLPEK-KRRLTTEQVHLLEKSFETENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKT 122
Query: 71 QTLELDYKTLQIRLNGVLAEKRKLEREVGRLRDELMKAQENL 112
+ LE DY L+ + +L+ + + +LR E+ E L
Sbjct: 123 KQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTEKL 164