BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0470.1
(410 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 233 6e-68
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 233 6e-68
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 100 8e-24
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 67 7e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 233 bits (594), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 213/437 (48%), Gaps = 72/437 (16%)
Query: 2 VWCKWVFKTKRDAEGNIKRYKARIVAKGYNQREGIDYSETFSPISKKDSLRVIMALVAHF 61
+ CKWV+K K +++G I+RYKAR+VAKGY Q+EGID+ ETFSP+ K S+++I+A+ A +
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 62 NLELHQMDVKTTFVNGDLNEDIYIEQADGFIEKGKDHLA----CKLKKLIYGLSEPQGS- 116
N LHQ+D+ F+NGDL+E+IY++ G+ + D L C LKK IYGL +
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 117 -------------------------------------------ASNDIHLLHETKHFLSK 133
SN+ + E K L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 134 SFDMKDLGDASYVLGIKIQRDRDAGVLCLSQRAYIDKILKRFGMEDCAPEYVPVVKGDGS 193
F ++DLG Y LG++I R +C QR Y +L G+ C P VP+ D S
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINIC--QRKYALDLLDETGLLGCKPSSVPM---DPS 361
Query: 194 ANNNA-----------------RKMRLKSDRPDIGFIVGMFGRFQKNPGVIHWKAVKKVF 236
+A R M L+ R DI F V +F + P + H +AV K+
Sbjct: 362 VTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
Query: 237 RYLQGTKDYMLVYRNSGVLEACGYTDSDFDGCRDSLKFTSGYIFMLAGGAISWRNAKQSL 296
Y++GT L Y + ++ ++D+ F C+D+ + T+GY L ISW++ KQ +
Sbjct: 422 HYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQV 481
Query: 297 ITSSTMEAEYVACFEATQHVVWLKNFISELSIVDSVHRPMKIYCDNAVVVRFVETDNLSK 356
++ S+ EAEY A AT ++WL F EL + + +P ++CDN + +
Sbjct: 482 VSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 357 RSKYIMIKYLYVRDKLV 373
R+K+I VR++ V
Sbjct: 540 RTKHIESDCHSVRERSV 556
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 233 bits (594), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/437 (31%), Positives = 213/437 (48%), Gaps = 72/437 (16%)
Query: 2 VWCKWVFKTKRDAEGNIKRYKARIVAKGYNQREGIDYSETFSPISKKDSLRVIMALVAHF 61
+ CKWV+K K +++G I+RYKAR+VAKGY Q+EGID+ ETFSP+ K S+++I+A+ A +
Sbjct: 127 IGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIY 186
Query: 62 NLELHQMDVKTTFVNGDLNEDIYIEQADGFIEKGKDHLA----CKLKKLIYGLSEPQGS- 116
N LHQ+D+ F+NGDL+E+IY++ G+ + D L C LKK IYGL +
Sbjct: 187 NFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQW 246
Query: 117 -------------------------------------------ASNDIHLLHETKHFLSK 133
SN+ + E K L
Sbjct: 247 FLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKS 306
Query: 134 SFDMKDLGDASYVLGIKIQRDRDAGVLCLSQRAYIDKILKRFGMEDCAPEYVPVVKGDGS 193
F ++DLG Y LG++I R +C QR Y +L G+ C P VP+ D S
Sbjct: 307 CFKLRDLGPLKYFLGLEIARSAAGINIC--QRKYALDLLDETGLLGCKPSSVPM---DPS 361
Query: 194 ANNNA-----------------RKMRLKSDRPDIGFIVGMFGRFQKNPGVIHWKAVKKVF 236
+A R M L+ R DI F V +F + P + H +AV K+
Sbjct: 362 VTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKIL 421
Query: 237 RYLQGTKDYMLVYRNSGVLEACGYTDSDFDGCRDSLKFTSGYIFMLAGGAISWRNAKQSL 296
Y++GT L Y + ++ ++D+ F C+D+ + T+GY L ISW++ KQ +
Sbjct: 422 HYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQV 481
Query: 297 ITSSTMEAEYVACFEATQHVVWLKNFISELSIVDSVHRPMKIYCDNAVVVRFVETDNLSK 356
++ S+ EAEY A AT ++WL F EL + + +P ++CDN + +
Sbjct: 482 VSKSSAEAEYRALSFATDEMMWLAQFFRELQL--PLSKPTLLFCDNTAAIHIATNAVFHE 539
Query: 357 RSKYIMIKYLYVRDKLV 373
R+K+I VR++ V
Sbjct: 540 RTKHIESDCHSVRERSV 556
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 99.8 bits (247), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 92/201 (45%), Gaps = 15/201 (7%)
Query: 131 LSKSFDMKDLGDASYVLGIKIQRDRDAGVLCLSQRAYIDKILKRFGMEDCAPEYVPVVKG 190
LS +F MKDLG Y LGI+I+ L LSQ Y ++IL GM DC P P+
Sbjct: 27 LSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTKYAEQILNNAGMLDCKPMSTPLPLK 84
Query: 191 DGSANNNARK-------------MRLKSDRPDIGFIVGMFGRFQKNPGVIHWKAVKKVFR 237
S+ + A+ L RPDI + V + + P + + +K+V R
Sbjct: 85 LNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNIVCQRMHEPTLADFDLLKRVLR 144
Query: 238 YLQGTKDYMLVYRNSGVLEACGYTDSDFDGCRDSLKFTSGYIFMLAGGAISWRNAKQSLI 297
Y++GT + L + L + DSD+ GC + + T+G+ L ISW +Q +
Sbjct: 145 YVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTTGFCTFLGCNIISWSAKRQPTV 204
Query: 298 TSSTMEAEYVACFEATQHVVW 318
+ S+ E EY A + W
Sbjct: 205 SRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 67.0 bits (162), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 40/52 (76%)
Query: 4 CKWVFKTKRDAEGNIKRYKARIVAKGYNQREGIDYSETFSPISKKDSLRVIM 55
CKWVFKTK ++G + R KAR+VAKG++Q EGI + ET+SP+ + ++R I+
Sbjct: 71 CKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTIL 122