BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Eca_sc000034.1_g0520.1
         (244 letters)

Database: Araport11_genes.201606.pep 
           48,359 sequences; 20,855,782 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343...   231   8e-75
AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWAR...    68   4e-14

>AT2G13770.1 | nuclease | Chr2:5736603-5737847 FORWARD LENGTH=343 |
           201606
          Length = 343

 Score =  231 bits (588), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 121/241 (50%), Positives = 152/241 (63%), Gaps = 26/241 (10%)

Query: 5   LFLQISSAVEAYDKEFVESCDAAKKIGLSPLQKMTVAMSMLAYGIEADATYDYVRVGEST 64
           LFL+I  A++ +D  FV+  D   K+GLS LQKMT A  MLAYG+ AD+T +Y+++GEST
Sbjct: 103 LFLRIYDAIKRHDNYFVQRRDGVGKLGLSGLQKMTAAFRMLAYGVPADSTDEYIKIGEST 162

Query: 65  TTKYLKRFYRGIIEIFDL------------------------AEGKTLPVKYNIVRKEYN 100
             + LKRF R I+E+F                          AEG   P  Y I  K YN
Sbjct: 163 ALESLKRFCRAIVEVFACCYLRSPDANDVARLLHIGESRGFPAEGTAPPASYVINGKPYN 222

Query: 101 IGYYLVDGIYPKWSTLVQTISQPLGLKKQHFAMMQEVCRKDLERAFGVLQSRFSIIKDPS 160
           +GYYL DGIYPKWSTLVQTI  P G KK+ FAM QE CRKD+ERAFGVLQ RF+I+  PS
Sbjct: 223 MGYYLADGIYPKWSTLVQTIHDPRGPKKKLFAMKQEACRKDVERAFGVLQLRFAIVAGPS 282

Query: 161 RFWDNNVLHDIMFAYIIMHNMIVEDEY-VNCTI-PNIFSKIPTIEIVENEVERFKRFLAR 218
           R W+  VLHDIM + IIMHNMI+EDE  ++  I   +   I  +E+  ++  RF+ FLAR
Sbjct: 283 RLWNKTVLHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQEFLAR 342

Query: 219 H 219
           H
Sbjct: 343 H 343


>AT3G22935.1 | hypothetical protein | Chr3:8130391-8131130 FORWARD
           LENGTH=157 | 201606
          Length = 157

 Score = 68.2 bits (165), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 33/70 (47%), Positives = 48/70 (68%), Gaps = 2/70 (2%)

Query: 159 PSRFWDNNVLHDIMFAYIIMHNMIVEDEY-VNCTIPN-IFSKIPTIEIVENEVERFKRFL 216
           PSR W+  +LHDIM + IIMHNMI+EDE  ++  I   +   I  +E+  ++  RF+ FL
Sbjct: 66  PSRLWNKTILHDIMTSCIIMHNMIIEDERDIDAPIEERVEVPIEEVEMTGDDDTRFQEFL 125

Query: 217 ARHKQIKDKK 226
           ARH+QIKD++
Sbjct: 126 ARHRQIKDRE 135


Top