BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0690.1
(136 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 48 6e-07
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 48 6e-07
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 47.8 bits (112), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 6 IYLRNMLKHLQCPQVGPTEVFLDNKSAIALSKNLVGHERSKHIDTHYHFILE 57
++L + LQ P PT +F DN +AI ++ N V HER+KHI++ H + E
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 47.8 bits (112), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 6 IYLRNMLKHLQCPQVGPTEVFLDNKSAIALSKNLVGHERSKHIDTHYHFILE 57
++L + LQ P PT +F DN +AI ++ N V HER+KHI++ H + E
Sbjct: 502 MWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHERTKHIESDCHSVRE 553