BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0830.1
(1328 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 354 e-103
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 354 e-103
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 131 8e-34
AT4G00980.1 | zinc knuckle (CCHC-type) family protein | Chr4:422... 107 9e-24
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 86 1e-18
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 354 bits (909), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/502 (38%), Positives = 309/502 (61%), Gaps = 13/502 (2%)
Query: 814 EPQTFTEAMATPEAPFWKEAVNSEIEFIMQNHTLELVDLLPGCTPLGCKWIFKRKLKMDG 873
EP T+ EA E W A++ EI + HT E+ L P P+GCKW++K K DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 874 SIDKYKARLVAQGFRQKEGLDYFDTYSLVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 933
+I++YKARLVA+G+ Q+EG+D+ +T+S V ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 934 GQLEEEIYMNQPEGFIAPGQEK----KVCRLVKSLYGLKQAPKQWHLKFDDTLLSNGFKI 989
G L+EEIYM P G+ A + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 990 NECDKCVYTKITAKGCVILCLYVDDMLIMGNNLDVINTTKKMLSKTFNMKDLGKSEVILG 1049
+ D + KITA + + +YVDD++I NN ++ K L F ++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1050 IKVSKTAAGISLSQTHYVEKILEKFSKDDLKMANTPIDPSIHLMKNT-GNAVRQLEYSRI 1108
++++++AAGI++ Q Y +L++ K ++ P+DPS+ ++ G+ V Y R+
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381
Query: 1109 IGSLMYLMNCTRPDIAYLVSKLSRFTSNPNNTHWNAITRVLRYLRKTKEYGLHYTTYPAV 1168
IG LMYL TR DI++ V+KLS+F+ P H A+ ++L Y++ T GL Y++ +
Sbjct: 382 IGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440
Query: 1169 -LEGYADANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEE 1227
L+ ++DA++ S D +ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
Query: 1228 AEWLRQFLEDIPIWPKPVPAINIHCDNQAAIALAQSKMYNGKSRHIRRRHNTVKQLLSEG 1287
WL QF ++ + P P + + CDN AAI +A + +++ +++HI ++V++ S
Sbjct: 501 MMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE-RSVY 557
Query: 1288 IITINYIRSKDNLADPFTKGLS 1309
T++Y + D FT+ LS
Sbjct: 558 QATLSYSFQAYDEQDGFTEYLS 579
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 354 bits (909), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/502 (38%), Positives = 309/502 (61%), Gaps = 13/502 (2%)
Query: 814 EPQTFTEAMATPEAPFWKEAVNSEIEFIMQNHTLELVDLLPGCTPLGCKWIFKRKLKMDG 873
EP T+ EA E W A++ EI + HT E+ L P P+GCKW++K K DG
Sbjct: 85 EPSTYNEA---KEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDG 141
Query: 874 SIDKYKARLVAQGFRQKEGLDYFDTYSLVSRITSIRVLVAIASLYNLEIHQMDVKTAFLN 933
+I++YKARLVA+G+ Q+EG+D+ +T+S V ++TS+++++AI+++YN +HQ+D+ AFLN
Sbjct: 142 TIERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLN 201
Query: 934 GQLEEEIYMNQPEGFIAPGQEK----KVCRLVKSLYGLKQAPKQWHLKFDDTLLSNGFKI 989
G L+EEIYM P G+ A + VC L KS+YGLKQA +QW LKF TL+ GF
Sbjct: 202 GDLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQ 261
Query: 990 NECDKCVYTKITAKGCVILCLYVDDMLIMGNNLDVINTTKKMLSKTFNMKDLGKSEVILG 1049
+ D + KITA + + +YVDD++I NN ++ K L F ++DLG + LG
Sbjct: 262 SHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLG 321
Query: 1050 IKVSKTAAGISLSQTHYVEKILEKFSKDDLKMANTPIDPSIHLMKNT-GNAVRQLEYSRI 1108
++++++AAGI++ Q Y +L++ K ++ P+DPS+ ++ G+ V Y R+
Sbjct: 322 LEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRL 381
Query: 1109 IGSLMYLMNCTRPDIAYLVSKLSRFTSNPNNTHWNAITRVLRYLRKTKEYGLHYTTYPAV 1168
IG LMYL TR DI++ V+KLS+F+ P H A+ ++L Y++ T GL Y++ +
Sbjct: 382 IGRLMYL-QITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGTVGQGLFYSSQAEM 440
Query: 1169 -LEGYADANWISDTDDTKSTSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEE 1227
L+ ++DA++ S D +ST+GY LG + ISWKS KQ +++S+ ++E+ AL A +E
Sbjct: 441 QLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQVVSKSSAEAEYRALSFATDE 500
Query: 1228 AEWLRQFLEDIPIWPKPVPAINIHCDNQAAIALAQSKMYNGKSRHIRRRHNTVKQLLSEG 1287
WL QF ++ + P P + + CDN AAI +A + +++ +++HI ++V++ S
Sbjct: 501 MMWLAQFFRELQL-PLSKPTL-LFCDNTAAIHIATNAVFHERTKHIESDCHSVRE-RSVY 557
Query: 1288 IITINYIRSKDNLADPFTKGLS 1309
T++Y + D FT+ LS
Sbjct: 558 QATLSYSFQAYDEQDGFTEYLS 579
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 131 bits (329), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 2/224 (0%)
Query: 1008 LCLYVDDMLIMGNNLDVINTTKKMLSKTFNMKDLGKSEVILGIKVSKTAAGISLSQTHYV 1067
L LYVDD+L+ G++ ++N LS TF+MKDLG LGI++ +G+ LSQT Y
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62
Query: 1068 EKILEKFSKDDLKMANTPIDPSIHLMKNTGNAVRQLEYSRIIGSLMYLMNCTRPDIAYLV 1127
E+IL D K +TP+ ++ +T ++ I+G+L YL TRPDI+Y V
Sbjct: 63 EQILNNAGMLDCKPMSTPLPLKLNSSVSTAKYPDPSDFRSIVGALQYL-TLTRPDISYAV 121
Query: 1128 SKLSRFTSNPNNTHWNAITRVLRYLRKTKEYGLHYTTYPAV-LEGYADANWISDTDDTKS 1186
+ + + P ++ + RVLRY++ T +GL+ + ++ + D++W T +S
Sbjct: 122 NIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRS 181
Query: 1187 TSGYVFTLGGAAISWKSSKQTCIARSTMDSEFIALDKAGEEAEW 1230
T+G+ LG ISW + +Q ++RS+ ++E+ AL E W
Sbjct: 182 TTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>AT4G00980.1 | zinc knuckle (CCHC-type) family protein |
Chr4:422732-424580 REVERSE LENGTH=488 | 201606
Length = 488
Score = 107 bits (267), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 145/311 (46%), Gaps = 30/311 (9%)
Query: 2 ARTRTTLRVIPPNTTNGE---KPEKFKGTDFNRWKLKMMFYLTTLGLVKYLTEEKPTHAE 58
AR T + ++++G K +F G + W +M +L L L L+E P+
Sbjct: 173 ARNGDTSEAVDKDSSHGFSVIKISRFDGKSYLYWASQMELFLKQLKLTYVLSEPCPSIGS 232
Query: 59 IEDEAQRTAEI-------EAWKQEDFLCKNYILNSLNDGLYNLYSV-IETSKQLWDTLIN 110
+ EI + W ++D+LC +++NSL+D LY YS + +K+LWD L
Sbjct: 233 SQGPETNPREITRADATGKKWLRDDYLCYTHLMNSLSDHLYRRYSQKFKHAKELWDELKW 292
Query: 111 KYKTEKAGVKKFIVGRFLDYKMTDSKPVMTQVQELQSLLQELQADNMITNEPFQVRALIE 170
Y+ +++ K+ V ++++++M + +P++ QVQ + + + M +E F V +I
Sbjct: 293 VYQCDESKSKRSQVRKYIEFRMVEERPILEQVQVFNKIADSIVSAGMFLDEAFHVSTIIS 352
Query: 171 KLPTGWKDFKNYLRHKNKDMSLEELILKLRIEEDSRLAEKNSERL-----SNVNVVETGP 225
K P W+ F L + L +L R++ + L ++ + + + +E P
Sbjct: 353 KFPPSWRGFCTRLMEEE---YLPVWMLMERVKAEEELLRNGAKGVTYRPATGSSQMERTP 409
Query: 226 SKKRKHLSKD--GGKQKKKTRFGQ----CYNCGKRGHLAKDC-----RSKTSKRHKKAND 274
S H G K+K+ R + C NCG++GHLAK C + S + + N
Sbjct: 410 SLGTTHRGSQSVGWKRKEPERDERVIIVCDNCGRKGHLAKHCWGSKSDERASGKSNRINS 469
Query: 275 QASLVEDTETQ 285
+ ++ETQ
Sbjct: 470 SVAAPVESETQ 480
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 85.5 bits (210), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Query: 807 LTYMVENEPQTFTEAMATPEAPFWKEAVNSEIEFIMQNHTLELVDLLPGCTPLGCKWIFK 866
+T ++ EP++ A+ P W +A+ E++ + +N T LV LGCKW+FK
Sbjct: 20 ITTTIKKEPKSVIFALKDPG---WCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFK 76
Query: 867 RKLKMDGSIDKYKARLVAQGFRQKEGLDYFDTYSLVSRITSIRVLVAIASLYNLEIHQ 924
KL DG++D+ KARLVA+GF Q+EG+ + +TYS V R +IR ++ +A LE+ Q
Sbjct: 77 TKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVAQ--QLEVGQ 132