BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0870.1
(375 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like... 49 5e-07
>ATMG00710.1 | Polynucleotidyl transferase%2C ribonuclease H-like
superfamily protein | ChrM:207553-207915 REVERSE
LENGTH=120 | 201606
Length = 120
Score = 48.9 bits (115), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Query: 147 ILEVARFVRLQAHLPLSFWGECVLTAVYLINKLPTPILRGLSPHEDLMGSPPDLSHLRVF 206
I+E R + + LP +F + TAV++INK P+ + P E S P S+LR F
Sbjct: 5 IIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVWFQSVPTYSYLRRF 64
Query: 207 GCLCYARIPLVKTKMDPRASVG 228
GC+ Y I + K+ PRA G
Sbjct: 65 GCVAY--IHCDEGKLKPRAKKG 84