BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0880.1
(355 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 240 2e-71
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 240 2e-71
ATMG00810.1 | DNA/RNA polymerases superfamily protein | ChrM:227... 143 1e-40
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 67 4e-13
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 240 bits (613), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 175/331 (52%), Gaps = 53/331 (16%)
Query: 71 KLSRQWFSKFSSVLLAKGLSQSKSDYSLFTYSSTSTQIFVLVYVDDIIITGNNSVAISQL 130
+ SRQWF KFS L+ G QS SD++ F + + + VLVYVDDIII NN A+ +L
Sbjct: 241 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300
Query: 131 KVFLDHTFSLKDLGRLQYFLGIEVYRSSKGIFLCQCKYALNIIKDSGLTASRPSDFPMEQ 190
K L F L+DLG L+YFLG+E+ RS+ GI +CQ KYAL+++ ++GL +PS PM+
Sbjct: 301 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 191 KLRLSPTDGVPLKDPSVYRRLIGRLMYLTVTR---------------------------- 222
+ S G D YRRLIGRLMYL +TR
Sbjct: 361 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420
Query: 223 ------------------------YCDSDWVGCPSTRHSTTGYFTILDSSPLSWKSKKQH 258
+ D+ + C TR ST GY L +S +SWKSKKQ
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 259 TDSKSSAEAEYRALAILTCELQWLKYLLLGFGIDHSSPMTVYCDNQAALHIADNPVFHER 318
SKSSAEAEYRAL+ T E+ WL + S P ++CDN AA+HIA N VFHER
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
Query: 319 TKHIEIDCHIFCEK-IKDNVIATRFTSSDNQ 348
TKHIE DCH E+ + ++ F + D Q
Sbjct: 541 TKHIESDCHSVRERSVYQATLSYSFQAYDEQ 571
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 3 EPTSFIQAMKSSHWWEAMSKEISALEANNTWSIVPLPPGKYPIGCKWVYKVKFKLDGSTS 62
EP+++ +A + W AM EI A+E +TW I LPP K PIGCKWVYK+K+ DG+
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT-- 142
Query: 63 VSKLSLSPKLSRQWFSKFSSVLLAKGLSQSK 93
++ + L+AKG +Q +
Sbjct: 143 --------------IERYKARLVAKGYTQQE 159
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 240 bits (613), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/331 (40%), Positives = 175/331 (52%), Gaps = 53/331 (16%)
Query: 71 KLSRQWFSKFSSVLLAKGLSQSKSDYSLFTYSSTSTQIFVLVYVDDIIITGNNSVAISQL 130
+ SRQWF KFS L+ G QS SD++ F + + + VLVYVDDIII NN A+ +L
Sbjct: 241 QASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDEL 300
Query: 131 KVFLDHTFSLKDLGRLQYFLGIEVYRSSKGIFLCQCKYALNIIKDSGLTASRPSDFPMEQ 190
K L F L+DLG L+YFLG+E+ RS+ GI +CQ KYAL+++ ++GL +PS PM+
Sbjct: 301 KSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDP 360
Query: 191 KLRLSPTDGVPLKDPSVYRRLIGRLMYLTVTR---------------------------- 222
+ S G D YRRLIGRLMYL +TR
Sbjct: 361 SVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKI 420
Query: 223 ------------------------YCDSDWVGCPSTRHSTTGYFTILDSSPLSWKSKKQH 258
+ D+ + C TR ST GY L +S +SWKSKKQ
Sbjct: 421 LHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTSLISWKSKKQQ 480
Query: 259 TDSKSSAEAEYRALAILTCELQWLKYLLLGFGIDHSSPMTVYCDNQAALHIADNPVFHER 318
SKSSAEAEYRAL+ T E+ WL + S P ++CDN AA+HIA N VFHER
Sbjct: 481 VVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIHIATNAVFHER 540
Query: 319 TKHIEIDCHIFCEK-IKDNVIATRFTSSDNQ 348
TKHIE DCH E+ + ++ F + D Q
Sbjct: 541 TKHIESDCHSVRERSVYQATLSYSFQAYDEQ 571
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 3 EPTSFIQAMKSSHWWEAMSKEISALEANNTWSIVPLPPGKYPIGCKWVYKVKFKLDGSTS 62
EP+++ +A + W AM EI A+E +TW I LPP K PIGCKWVYK+K+ DG+
Sbjct: 85 EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGT-- 142
Query: 63 VSKLSLSPKLSRQWFSKFSSVLLAKGLSQSK 93
++ + L+AKG +Q +
Sbjct: 143 --------------IERYKARLVAKGYTQQE 159
>ATMG00810.1 | DNA/RNA polymerases superfamily protein |
ChrM:227709-228431 REVERSE LENGTH=240 | 201606
Length = 240
Score = 143 bits (360), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 115/226 (50%), Gaps = 53/226 (23%)
Query: 108 IFVLVYVDDIIITGNNSVAISQLKVFLDHTFSLKDLGRLQYFLGIEVYRSSKGIFLCQCK 167
+++L+YVDDI++TG+++ ++ L L TFS+KDLG + YFLGI++ G+FL Q K
Sbjct: 1 MYLLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTK 60
Query: 168 YALNIIKDSGLTASRPSDFPMEQKLRLSPTDGVPLKDPSVYRRLIGRLMYLTVTR----- 222
YA I+ ++G+ +P P+ KL S DPS +R ++G L YLT+TR
Sbjct: 61 YAEQILNNAGMLDCKPMSTPLPLKLN-SSVSTAKYPDPSDFRSIVGALQYLTLTRPDISY 119
Query: 223 -----------------------------------------------YCDSDWVGCPSTR 235
+CDSDW GC STR
Sbjct: 120 AVNIVCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTR 179
Query: 236 HSTTGYFTILDSSPLSWKSKKQHTDSKSSAEAEYRALAILTCELQW 281
STTG+ T L + +SW +K+Q T S+SS E EYRALA+ EL W
Sbjct: 180 RSTTGFCTFLGCNIISWSAKRQPTVSRSSTETEYRALALTAAELTW 225
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 67.4 bits (163), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 16/100 (16%)
Query: 3 EPTSFIQAMKSSHWWEAMSKEISALEANNTWSIVPLPPGKYPIGCKWVYKVKFKLDGSTS 62
EP S I A+K W +AM +E+ AL N TW +VP P + +GCKWV+K K DG+
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGT-- 84
Query: 63 VSKLSLSPKLSRQWFSKFSSVLLAKGLSQSKSDYSLFTYS 102
+ + L+AKG Q + Y + TYS
Sbjct: 85 --------------LDRLKARLVAKGFHQEEGIYFVETYS 110