BLAST Resut
BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Eca_sc000034.1_g0940.1
(116 letters)
Database: Araport11_genes.201606.pep
48,359 sequences; 20,855,782 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymeras... 75 7e-18
AT4G23160.3 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 71 2e-15
AT4G23160.2 | cysteine-rich RECEPTOR-like kinase | Chr4:12129485... 71 2e-15
>ATMG00820.1 | Reverse transcriptase (RNA-dependent DNA polymerase)
| ChrM:228573-229085 REVERSE LENGTH=170 | 201606
Length = 170
Score = 74.7 bits (182), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 59/112 (52%), Gaps = 18/112 (16%)
Query: 1 MQTRLKSGISKLKAIPDHVAHFTIPHAMPTAYVMSLQSEI--EPKSYKEASKHEHWQLAM 58
M TR K+GI+KL Y +++ + I EPKS A K W AM
Sbjct: 1 MLTRSKAGINKLNP----------------KYSLTITTTIKKEPKSVIFALKDPGWCQAM 44
Query: 59 NDEYQALMKNNTWSLTPRLSDMNVLGYRWVYKIKYKSDRSLERYKARLVAKA 110
+E AL +N TW L P + N+LG +WV+K K SD +L+R KARLVAK
Sbjct: 45 QEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKG 96
>AT4G23160.3 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.2 bits (173), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 31 AYVMSLQSEIEPKSYKEASKHEHWQLAMNDEYQALMKNNTWSLTPRLSDMNVLGYRWVYK 90
++++ + EP +Y EA + W AM+DE A+ +TW + + +G +WVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 91 IKYKSDRSLERYKARLVAKATTSNK 115
IKY SD ++ERYKARLVAK T +
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQE 159
>AT4G23160.2 | cysteine-rich RECEPTOR-like kinase |
Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
Length = 1043
Score = 71.2 bits (173), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/85 (40%), Positives = 51/85 (60%)
Query: 31 AYVMSLQSEIEPKSYKEASKHEHWQLAMNDEYQALMKNNTWSLTPRLSDMNVLGYRWVYK 90
++++ + EP +Y EA + W AM+DE A+ +TW + + +G +WVYK
Sbjct: 75 SFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYK 134
Query: 91 IKYKSDRSLERYKARLVAKATTSNK 115
IKY SD ++ERYKARLVAK T +
Sbjct: 135 IKYNSDGTIERYKARLVAKGYTQQE 159